| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0577 |
|---|
| Symbol | |
|---|
| ID | 5454015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 636134 |
|---|
| End bp | 637153 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640876146 |
|---|
| Product | taurine catabolism dioxygenase TauD/TfdA |
|---|
| Protein accession | YP_001411857 |
|---|
| Protein GI | 154251033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGC GCATTCTGGA AACCGCATCG GACTGGCGAG CCTCCGACAT CGCCGACGAG
GAGGGATGGA CGCTTCGTCT TTCGGCTGCG GATGTTGCCG AGATCGATGC CGCGCTCGCA
CATGCCAAGG CGAAAGGAAG CGACCTCCTC GACGTGACGA AAGTGGATTT TCCGCTGCCG
CTGCTGGCGG GAAAACTTGC CCGGCTAGAG GATGACCTCA TCAACGGCCG CGGCTTCTGC
CGCATCGCGG GCCTGCCCGT GGAGCGCTAT TCCGATGACG ACGCGTCGCT TATCTATTGG
GGCATCGGCA TGCATCTCGG CAAACCCTGG CCGCAGAACA AGCATGGGCA TCTGCTTGGC
GATGTGACGG ACCAGGGGAA GTCGGGTGCC GACCCGACCT CGCGCGGCAA TGAAATCGGC
GGCGTCGCCT TTCCCTACCA TTCGGACGGC TCGGACCTTG TCGGCCTGAT GTGTCTTCGC
AAGGCGAAGT CCGGCGGTAT CTCGACGGTG GCGAACGCGG TTGCGATCCA CAATGAGTTG
GTACGGACGC GCCCCGACCT CGCGGCGCTG CTTTATGAGC CGCAGCCCTA TGATTATCGC
GGCGAGCAAC CGGAGGGCGG CCAGCCTTTC TACTTCGTGC CTGTCTTCAC CGAACATGGC
GGCCGGTTGT TCGTGCGCTA CATCCGGCCT TATATCGAGT CGAGCCAGCG CCACGCGGAC
GCGCCGCGCC TGAGCGCGAA GGCGCGAGAG GCTTTCGATC TGGTGGATGC GATGTGCGCC
GATCCCGCCT TCAATGTCTA TATGGACCTG GAACCCGGCG ACATGCAGTT CGTGAACAAC
TACCACGTGT TGCACGCGCG GACGGCCTAT GAGGACTGGC CCGAGCGGAA CCGCAAGCGG
CACCTGAAGC GCCTGTGGCT GGAAACCGCG CAACTGACGG ACCGCCCGGA GCGGTTCCGT
AACTTCTCGT CGCACTGGTC GAAAAACCGC ACCAAAAGCG AATTGAAGAT GGATGCCTGA
|
|---|
| Protein sequence | MTPRILETAS DWRASDIADE EGWTLRLSAA DVAEIDAALA HAKAKGSDLL DVTKVDFPLP
LLAGKLARLE DDLINGRGFC RIAGLPVERY SDDDASLIYW GIGMHLGKPW PQNKHGHLLG
DVTDQGKSGA DPTSRGNEIG GVAFPYHSDG SDLVGLMCLR KAKSGGISTV ANAVAIHNEL
VRTRPDLAAL LYEPQPYDYR GEQPEGGQPF YFVPVFTEHG GRLFVRYIRP YIESSQRHAD
APRLSAKARE AFDLVDAMCA DPAFNVYMDL EPGDMQFVNN YHVLHARTAY EDWPERNRKR
HLKRLWLETA QLTDRPERFR NFSSHWSKNR TKSELKMDA
|
|---|
| |