| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0528 |
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| Symbol | |
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| ID | 5454917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 566193 |
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| End bp | 567713 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876095 |
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| Product | ribonuclease |
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| Protein accession | YP_001411808 |
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| Protein GI | 154250984 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0557829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0741162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG AAGTATTGAT CAATGTCGGT CCCGGCGAGA CGCGCGTCGC GATCGTTGAG
GACGGACGTC CGGTGGAGCT CTTTCTCGAG CGCACCATGG AGGACGACCT GAAGGCAAAG
ACAGGTCGCG CCGGCCATTC GCTTATCGGC AATATTTTTC TCGGCCGCGT GCAGCGCGTG
CTGCCGGGCA TGCAGGCGGC GTTTGTTGAA GTCGGCCTCG AGCGCGCCGG CTTTCTCGGC
GCGCGCGAGG CGCGTTGCCT GTGCGAGCTG ACAGGCCTCG ATGAAGGCAC GCTGCCGCCG
ATCAGTGCCT GCGTGCAGGA AGGACAGACG ATCCTCGTGC AGGCGGTGAA GGACCCGATC
AGCGACAAGG GCGCGCGGCT TTCCGCCAAT GTAACGATCC CTGGCCGTCT TCTCGTCCTC
GTTCCTAATC AGTCCGGCGT CGCCCTCTCG CGCCGCATCG AAGACGAACC GGAACGCGAA
CGCCTCGCGG CGCTCGTCGA GGAAATGGTC GAGCGTTTCA ATCCGATGGG CGTCACCGGC
GAGCCTGCGG GCTTTATCGT CCGCACCGCC GCCATCGGCG CAACTGCCGA GGACATAGCC
GCCGATGCGC GCCAGCTCGC CGAGGAGTGG CGGAAGGTGC GCGAGACGGA AAAGCGTTCC
ACCGCGCCCT GTGTCGTCTT CCACGACCTC GATCCTGTTT CCAAAACGCT GCGCGATTGC
GTCAGCGCCG ATACCTCGCG CGTGTTGATC GACTGCGCCG ATGCCTTCGG CGAGGCGCAG
CGTTATTGCC GCCGCGCCAT GCCGGAAATG CTCGACCGCA TTCAGCTTTT CAACGGCCCC
GGTCAGTTGT TCTCGCTCTA CGATGTCGAT GGCGAAATCG AAGCGGCACT GGAGCCGCGC
GCCGAGCTTC CGTCGGGCGG CTGGATCACG GTCGAAACCA CGGAAGCGCT GACCGCGATA
GACGTCAATT CAGGACGCTA CACGGCAGCG ACGGGCCTCG AAGAGACCAG CGTCAAGATC
AACCTCGAAG CCGTGCACGA AATCGTCTAT CAGCTTCGCC TGCGCGGCAC CGGCGGTCTC
ATCGTCATCG ACTTCATACA CCTGAACGAT CCCGCCAATA TCCAGAAGGT GATCGACGCC
TTGAACGAAG GCTTCGCGAA GGACCGCGTG CCGACGCAGA TTTCCGGCAT GTCGGAATTC
GGCCTCGTCG AGATGACGCG AAAGCGTGTG CGCGAGCCGC TCGACAAATT GCTCACCGAG
CCCGCCTATC CGCATGGCCG CCCGCGCCGC AAGACCTGCG CGACGATGGC GAACGATCTT
CTGCGCCGTA TCGCCCGCGA AGCCCAGGCG ACCCCCGGCC GCCCGCTTGT TGCGCGCGCC
TCGGTGGAAG TCGTGGATTG GCTCGAGCGC GGAAATCCCT ATCTCGTTGA GAGATTGCGC
CGGAAAGTTC CCGCCGATAT CAGCCTGATC GGTGAGCCCG CTTTCCCGCG CGAGCGCATC
GATGTAGGCA TCGTGCAATA G
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| Protein sequence | MSEEVLINVG PGETRVAIVE DGRPVELFLE RTMEDDLKAK TGRAGHSLIG NIFLGRVQRV
LPGMQAAFVE VGLERAGFLG AREARCLCEL TGLDEGTLPP ISACVQEGQT ILVQAVKDPI
SDKGARLSAN VTIPGRLLVL VPNQSGVALS RRIEDEPERE RLAALVEEMV ERFNPMGVTG
EPAGFIVRTA AIGATAEDIA ADARQLAEEW RKVRETEKRS TAPCVVFHDL DPVSKTLRDC
VSADTSRVLI DCADAFGEAQ RYCRRAMPEM LDRIQLFNGP GQLFSLYDVD GEIEAALEPR
AELPSGGWIT VETTEALTAI DVNSGRYTAA TGLEETSVKI NLEAVHEIVY QLRLRGTGGL
IVIDFIHLND PANIQKVIDA LNEGFAKDRV PTQISGMSEF GLVEMTRKRV REPLDKLLTE
PAYPHGRPRR KTCATMANDL LRRIAREAQA TPGRPLVARA SVEVVDWLER GNPYLVERLR
RKVPADISLI GEPAFPRERI DVGIVQ
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