| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0492 |
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| Symbol | |
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| ID | 5454945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 531500 |
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| End bp | 532039 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876058 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001411772 |
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| Protein GI | 154250948 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.838817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCGCC GGGATCTTCG GCTGACATGC CTTTTGCCCT TACCTTTGCC GGTGCGGGCC
TTTTCTTGTG CCGCGCGGCG CGAGAGGCTA GACAAGGGCG CATCCGATCC CTCTCTCCCT
CCGGAAGTAT TCATGAGTTC CACCCAGGTC GATACAAGCG GCTTCGGCGC CTATGCCGGA
CCGGTGCGGC GCGTGCAACG CGACGGACAG GATGTCTTCA CATTCGAAAT CGCCCCGCAC
CACCTGAACG GCGCGGACAG GCTGCATGGC GGCATGATGA TGACGCTAGC GGCAATCGTG
CTTGGGCAGG TGGCGAAAGA CGCGGCGGCG GCAAAGCAGC CGGACGCCGA AGTGCGGCCG
CTTTCCGTCA ATTGCGATTT CGTGAGCGCG GGCGAGAAGG GGGAGGAAGT TGAAGGACGC
GCGGAGGTGA CGCGCGCGAC GCGGACTGTG CTTTTCATTT CGGGGGACCT GCGCGTCGGC
AGCCGCATCC TGATGACGGC GACCGGCGTC TACGCGATCA AGGAGAAGGG CGCGGCGTGA
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| Protein sequence | MRRRDLRLTC LLPLPLPVRA FSCAARRERL DKGASDPSLP PEVFMSSTQV DTSGFGAYAG
PVRRVQRDGQ DVFTFEIAPH HLNGADRLHG GMMMTLAAIV LGQVAKDAAA AKQPDAEVRP
LSVNCDFVSA GEKGEEVEGR AEVTRATRTV LFISGDLRVG SRILMTATGV YAIKEKGAA
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