Gene Plav_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0481 
Symbol 
ID5457035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp522104 
End bp522916 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID640876047 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001411761 
Protein GI154250937 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACA CGCAGATCAC GACGGAGAAG CGCGGCAATA TTCTCATCCT GACGCTCAAC 
CGCCCCGACA GGCTGAATGC CTGGACGGCG CGGATGGCGG AGGAGCAGAC GCATGCGATC
CAGCAGGCGA ATGACGACCC GGATATCGGC GCCATCGTGA TGACGGGCGC GGGGCGCGGC
TTTTGCGCGG GCGCCGACAT CAGCGATACG TTCCAGTCGC GCATCGACGG CAAGGACCGC
AACAACGAGA CCGGCGGCAT GCCGCGCGAG GTGGACTGGA TCGAACTTGT CCGCTCGTCA
AAGCCGATGA TCGCTGCAGT GAACGGGCCG GCGGTGGGCA TCGGCGTCAC CATGATCCTG
CCTTTCGATG TGATCGTGGC GGCGGAGGAA GCGAAATTCG GCATGGTGTT CGTGAAGATG
GGGATCGTGC CGGAGCTTGC TTCGTCGCAT TTCCTCGTCA GCCGAATGGG CTGGGGCCAT
GCGAACGAGA TGATGCTTTC GGCGCGACTC TACCCGGCGG CGGAAGCGAA GGAAAAGGGC
CTGTGCGAAT ATGCCGTTCC GCAGGCGGAG CTTCTCGACA AGGCGCTGGA GATTGCCGGC
CGGATCGCGG AGAACCCGTC GCGCCAGCTT CGCATGACCA AGCAGCTCAT CTCGCAGAAT
GCGTGCGAGA CGGACATGAA GGCGGCGCAG AAGCGCGAAA TCGAGGCGCT GAAGATCTGC
TACACATCGG CGGAGCACAA GGAAGCGGTG GACGCCTTCC TCAACAAGCG CAAGCCCGAC
TTCAGAAAGG CCGCGAGCGC AGCCGCGGAG TGA
 
Protein sequence
MDYTQITTEK RGNILILTLN RPDRLNAWTA RMAEEQTHAI QQANDDPDIG AIVMTGAGRG 
FCAGADISDT FQSRIDGKDR NNETGGMPRE VDWIELVRSS KPMIAAVNGP AVGIGVTMIL
PFDVIVAAEE AKFGMVFVKM GIVPELASSH FLVSRMGWGH ANEMMLSARL YPAAEAKEKG
LCEYAVPQAE LLDKALEIAG RIAENPSRQL RMTKQLISQN ACETDMKAAQ KREIEALKIC
YTSAEHKEAV DAFLNKRKPD FRKAASAAAE