| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0425 |
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| Symbol | |
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| ID | 5455343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 459054 |
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| End bp | 460013 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875991 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001411705 |
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| Protein GI | 154250881 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.495581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTC TCCTTTACGC AAATCTTATC GCGATTGTCG TGCTGGCAGG CGCGCTTGCA
CGCCTTTACG AAGGAGCACC TCTGCCTTGG CTGGAGGCAA AGAATGAGCA GCCGGCGCCC
TCTGAAACCG TGCCGCCGCT GGCATCGCAA CCTTCGCCTC CGCTCTCCGT CGAGCAGATA
TTGGCGCTGC AGCTGCCCTT GCCGAACCCC GACCGTCCCG CCGCCGAGGC CCCGTCGCCC
GCGCGCCGGT CGCTTGTGCT TCTCACGGAA GGCGACTATC GGCCCTTCAA CTACCGGGAT
GAAACCGGTG CGCTTTCAGG TTTCGATATC GAGCTTGCCG CTGCGCTTTG TCTGCGTCTC
GATGCCGATT GCCACTTCGA AACGCGGTCA TGGGAGCAGT TGATCCCGGC GCTGAAGCGC
GGCGAGGGCA ATGCCGTGAT CGCTTCATTG CTGATCCCCG TGCCCGGCCG GCAAAGCTAC
CCGGCGGAAG AAAGTTTGAT TTTCACGCAG AGCTACTATT CGACGCCCGG CCGTTTCGCC
GCCCGAAAGG ACGATGCGCC GGTTGCGGCC ACGCCGGCGG CGCTTGCCGG AAAAGAGATC
GCGGTCCAGG CGGGGTCCGT CCACGAAGCG TTCGCCCGCT CGCGTTTTGC CAGCGCGCGC
CTTCGTACGT TCGCTACACC GGAAGACGCC GAGAAAGCGC TTGCCGAAGG CAGCGTCGAT
CTGCTCTTCG CGGACCGCAA TGAGCTTCTG CTCTGGACCT CGGGCTTGTC CGGCGCCTGC
TGCCGTCTCG TCGGTTCGGA CTACGCAGAC GCGGTATTCT TTGGTGAAGG GGCGGGCATT
GCTCTCCGCG CGGCGGATGT TGCCCTGCGG GACGAGATAG ACAAGGCGCT CTCCGCGCTC
GTGGCAGACG GGACCTATGC GCGCGTCAGC GCCCGTTATT TCACCGCCAG TATTTACTGA
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| Protein sequence | MRFLLYANLI AIVVLAGALA RLYEGAPLPW LEAKNEQPAP SETVPPLASQ PSPPLSVEQI
LALQLPLPNP DRPAAEAPSP ARRSLVLLTE GDYRPFNYRD ETGALSGFDI ELAAALCLRL
DADCHFETRS WEQLIPALKR GEGNAVIASL LIPVPGRQSY PAEESLIFTQ SYYSTPGRFA
ARKDDAPVAA TPAALAGKEI AVQAGSVHEA FARSRFASAR LRTFATPEDA EKALAEGSVD
LLFADRNELL LWTSGLSGAC CRLVGSDYAD AVFFGEGAGI ALRAADVALR DEIDKALSAL
VADGTYARVS ARYFTASIY
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