| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0028 |
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| Symbol | |
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| ID | 5455733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 32770 |
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| End bp | 33618 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875587 |
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| Product | sterol desaturase |
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| Protein accession | YP_001411308 |
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| Protein GI | 154250484 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.178339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTTC TGATTTCGCG CCTGCTCTGG CCGCTGCTGG CGGGTGGCTC GCTATCGCTG
ATCTATCTCG GCATGGAGGC GGGCCACGGC ATTCTCGCGT TCAATCTGAG CTATCTCGGC
CTGGCGCTGA CCATCGCCGT GCTGGAGCGC GCGATGCCGC ATGAGCGCGG CTGGCTCGCC
AATGACGGGC AGATGGGCCC CGACCTCGCG CATACGCTGC TCAGCAAGGG CATCGCGCAG
GTCATCGTCA CGGTGATTGT GTTCATGGGG ATCGCGGAAT GGGTAAAGCC TGCGGACAGT
CCCCTCTGGC CGGAGAGCTG GCCGCTCGCC GCGCAGGTCG CGCTCGGCCT CGTGCTTGTC
GAGGCGGGGC TCTACTGGAA GCACCGGCTC GCCCATGAAT GGCCCTGGCT CTGGCGCTTC
CATGCCGTTC ATCACAGCGT AACGCGGCTC TGGTTCTTCA ATACCGGCCG CTTCCATCCC
GTCGACACGG TGACGGGGTT GCTGGTCGGC ATCCCGCTGC TTCTGCTCCT CGGTGCGCCG
CAGCCCGTAT TGCTGATGGT GAGCGCGGTG ACGGCCGTCA TCGGCATCCT CACCCATTGC
AATATCGAAA TGCGCTGCGG GCCCTTGAGC TATGTCTTCA ACACGCCGGA AACGCATCGC
TGGCATCACT CGAAGAATCT CGACGAGGGC AATCGCAACT ATGGCGAGAA CCTGATGCTG
TTCGACATGC TCTTCGGCAC CTATATCAAT CCGCGCCGCC GTCCGCCCGC CGATATCGGC
ATCGAGCACG AGATGCCCGC CGATTTCATC GGCCAGCTTA AAATCCCCTT CACCCGCGCG
CCGCTTTGA
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| Protein sequence | MHVLISRLLW PLLAGGSLSL IYLGMEAGHG ILAFNLSYLG LALTIAVLER AMPHERGWLA
NDGQMGPDLA HTLLSKGIAQ VIVTVIVFMG IAEWVKPADS PLWPESWPLA AQVALGLVLV
EAGLYWKHRL AHEWPWLWRF HAVHHSVTRL WFFNTGRFHP VDTVTGLLVG IPLLLLLGAP
QPVLLMVSAV TAVIGILTHC NIEMRCGPLS YVFNTPETHR WHHSKNLDEG NRNYGENLML
FDMLFGTYIN PRRRPPADIG IEHEMPADFI GQLKIPFTRA PL
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