Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1955 |
Symbol | |
ID | 4617790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1769775 |
End bp | 1770698 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639785046 |
Product | transport system permease protein |
Protein accession | YP_931445 |
Protein GI | 119873438 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.443661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 1.2483500000000002e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGGCGGC TCCTCCTCCT GGCGGCTCCC GTGCTTTTTT CCGCCGAACT CCTCCTCGGG CCGGCGGGCC TAGACTGGGG GATAGTGGGC GCCGTTAGAC TCCCCAGAGC CCTCGGCGCC GCCGTGTCGG GCGCCCTCCT GGGGATGTCG GGGCTGTTGC TACAGACCTC TCTGAGGAAC CCCTTGGCGG ATCCCTACGT TCTGGGGGTA AGCGGCACGG CAATGTTGGC GGCTCTAGGC TCTTATCTTC TCTGGCGCCT GTGGGGCCTC CCCTATGTGG GCTACTTCCT AGGCGCGGTG GTCGGGGCGG CTGTAGTAAT TGTAGGATTG ACGACGCTGG CTAGGAGAGC CTCTCTCTTT GTGGTGTTAA TGGTGGGGAT CCTCGTTTCC TTTGTCACTG GGGCGGCTCT CCAGTTGGCT CTCCTCTTGC TTCCGCCGGA AGAGCTTGGC TACATATACC TCGGCTTGCA GGGGAACTAC GGGGCCTATC CGCCCGGCCT TCTGGGGTGG GCCGTGGCTG GAGCTTCTGT TGTCCTATTG GCAACGGTGT ATCTAAACTC CCGGCACATC TCGGCGCTTG TCCATGGGGA GGAGGCGGCG GCTGGCCTGG GGGTAAACGT GAGGAGAGTC TCGGCGTTAG TGGTGGCGGC GGCTTCTGCG GGGGCCGGCC TTGCTGTGGC GTCGGTGGGA CCGGTGGGGT TTGTGGGTCT TCTGGCGCCT CACATGGCCC GATGGGCGGC GGGTAGCCAC AGGGTCGACA AGATCCTCTT CGACGCAGCG GCGATGGGGG CCGTCCTCTC GCTGGGGGCG GACCTCGCCA TGAGGTTGCT CCTGCCGAGG GACGTGCCGG CGAACGTGGT GCTGTCTATC GTGGGGGCGC CGGCGGCGGC CCTCCTCATG TGGAGGTATG TACGTAGAGT TTGA
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Protein sequence | MRRLLLLAAP VLFSAELLLG PAGLDWGIVG AVRLPRALGA AVSGALLGMS GLLLQTSLRN PLADPYVLGV SGTAMLAALG SYLLWRLWGL PYVGYFLGAV VGAAVVIVGL TTLARRASLF VVLMVGILVS FVTGAALQLA LLLLPPEELG YIYLGLQGNY GAYPPGLLGW AVAGASVVLL ATVYLNSRHI SALVHGEEAA AGLGVNVRRV SALVVAAASA GAGLAVASVG PVGFVGLLAP HMARWAAGSH RVDKILFDAA AMGAVLSLGA DLAMRLLLPR DVPANVVLSI VGAPAAALLM WRYVRRV
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