Gene Pisl_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1645 
Symbol 
ID4616439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1493274 
End bp1494191 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content47% 
IMG OID639784728 
Productbifunctional phosphoglucose/phosphomannose isomerase 
Protein accessionYP_931140 
Protein GI119873133 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID[TIGR02128] bifunctional phosphoglucose/phosphomannose isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0813074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG TGAACATGTT GGAAGACTAC CTAAGCTGGG AACGCTATAT AATAAAGAAT 
GTCAACATAC CGCTTAGTTA CCGTATAGAA GGAGTGGAAA TATCGATAGA GCCGACGCCT
AGGCTTTATA TTAGCGGTAT GGGCGGCTCT GGCGTAGTGG GGGATCTTAT TAGAGATCTT
TCCATAGTGT GGAATTGGGA TTTTGAAGTG ATACCTGTAA AAGACTACTT TTTAAGGGCT
AGAGACGGTT TGTTAATTGC TGTGTCTTAC TCTGGGAACA CCGTAGAAAC TCTATATACT
GTAGAATATG CAAAAAAGAA GAGAATTCCG GCTATAGCCA TAACCACGGG CGGCAGACTT
GCGCAAGCCG GTATTCCAAC AGTAATAGTG CCAAAGGCCT CTGCGCCACG CGCCGCGCTT
CCACAGCTAT TTACAGCGGC TCTCCACGTA ATACGTCACA TCTATGGTAT AAATATTGAA
ATTCCTGACT TCTTAGAGCC AATAAACGAG GGCCTTGTCC AAAGCTTGAT TGTAGAGTTT
CAAAAAAGAC CGACTATTGT AGCGCCTGAG AGCATGAGGG GCGTGGCGTA CCGCGTAAAA
AACGAATTTA ATGAAAATAG CAAGATAGAG CCCTCTGTAG AGATCCTCCC AGAGGCTCAC
CATAATTGGA TTGAGGGAGC TGAACGGCCC GTGGTGGCAT TGACAAGTCC CCATATACCG
CCAGAACACC GTGAGCGGGT AAAAGCGACG TTAGAAATCC TCGGCGGGGT ACAATACACA
GTGGAGATGC ACCCAAGAGG TATACTCTCT TTCCTTAGGG AAGTTGGTAT AGCGTCAGTT
AAACTTGCGG AAACCAAAGG GGTGAATCCC CTGGCAACTC CGCGGATCGA CGCCTTAAAG
AGGAGACTCC AGCGATGA
 
Protein sequence
MSNVNMLEDY LSWERYIIKN VNIPLSYRIE GVEISIEPTP RLYISGMGGS GVVGDLIRDL 
SIVWNWDFEV IPVKDYFLRA RDGLLIAVSY SGNTVETLYT VEYAKKKRIP AIAITTGGRL
AQAGIPTVIV PKASAPRAAL PQLFTAALHV IRHIYGINIE IPDFLEPINE GLVQSLIVEF
QKRPTIVAPE SMRGVAYRVK NEFNENSKIE PSVEILPEAH HNWIEGAERP VVALTSPHIP
PEHRERVKAT LEILGGVQYT VEMHPRGILS FLREVGIASV KLAETKGVNP LATPRIDALK
RRLQR