Gene Pisl_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1555 
Symbol 
ID4618181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1422728 
End bp1423405 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content57% 
IMG OID639784637 
Productmethyltransferase small 
Protein accessionYP_931052 
Protein GI119873045 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTACGCG CAGAGATAGC CAGAGCCGCC CTCCGTATTT TACACGCCGC ATCGCCAGCC 
GCGGTGTATA GATTTAGAGA CATGGCGCTC TACATCCCAC GCGGCGTCTT CAACCCCGTC
TTCGCCGTAT CAACAGCCCT CGCCATAAGC CACATAGACG CCAGAGGCAG AGTAGCCGAC
TTAGGCACAG GCTCAGGCGC CATAGCCATA GCCCTAGCCA AAAGCCCCCA GGTAGAGACA
GTGTGCGCCT ACGACATAAG CCCCCTAGCC CTCGCCACGG CAAGAGTCAA CGCAGAGATA
AACAGAGTGG CGCACAAAGT CGCAATCTGC CCAACAAGAA AAGCCCTACT AGCCGCGGCC
CCCTACGACG TAGTTACGGC AAACCCACCC TACCTCCCCC TAGACCCAAG AGACGAAAAA
GACAAAAACT GGTGCGCCGG CCGCCACCTA GAGGCCATAA GAGAAATCAC AGCCCAAGCA
ACCCACATAC TCAAGCCAGG GGGAACACTC TACATCACAG CCTCAACACT CACCGACATG
AAGCAGGCCG CCAAAATACT AGCCCAACAC GGCCTCACCC CAAAGATAAA AGCCTGCACA
ACAACCCCCC TAGACCACAT ATGCCTCATA GAGGCGCACA AGACCCCACA ACTGAGACAC
GCCCTGCCTA AGCCCTAG
 
Protein sequence
MLRAEIARAA LRILHAASPA AVYRFRDMAL YIPRGVFNPV FAVSTALAIS HIDARGRVAD 
LGTGSGAIAI ALAKSPQVET VCAYDISPLA LATARVNAEI NRVAHKVAIC PTRKALLAAA
PYDVVTANPP YLPLDPRDEK DKNWCAGRHL EAIREITAQA THILKPGGTL YITASTLTDM
KQAAKILAQH GLTPKIKACT TTPLDHICLI EAHKTPQLRH ALPKP