Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1524 |
Symbol | |
ID | 4618027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1389721 |
End bp | 1391100 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639784606 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_931022 |
Protein GI | 119873015 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0533175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.466259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGTCC TAGGCGCTCT AGCTTGGATT TCTACCCAGC CTTCGGCGCC CCCCACTACT TCTCCAGCTA AACAATCTCC AACTACGTCT TCTCCCGTAA CTTCTCCAAC GCCATCGCCT ACCACCTCTA CGCCACCTCA AACAACTACC CAGCCCCCCT CTGTGGCTAA ATGTCCCGAC GAAATTGTCA TAGGCACCGC GATGCCGATC TCAGGCAGAT ACGCCGCCGA GGGTCAGTAC TCTCTTTGGG GCGCGCTGGC CGTCGTAAAC TGGATCAACG ACAGAGGCGG CGTTGACTGC GGCGGCAAGA AGGTAAAGGT GCGGCTTATA TATAGAGATA GTGAGTCTAA GCTAGAGCTG GCCCAGAGCA TAACCGAGTC TCTCGTGACG CAAGACAAGG TCAACTTCTT GCTCAGCCCA TACGGCTCCG ACCTAGCCCT TGGCGTTTCG CCAATTGCAG AGAAATACGG CGTGTTGATG GCGGTGGTCG GCGCCTCTTC AGACCGTATC TTCCAGCAGG GCTTTAAGTA CGTCGTGGGC GTGGCCGCGC CGGCGAGTCA ATATATGGTC CCCGTGTTGG ACATGGTAGT GAAGCGGGAC CCCACGGCGA AGAAGGTGGC CATCTTATAC AGAGACAGCG AGTTTAACAG ACAGGTGGCG GAGGGGGCGA AGGCCTATGC GGAGAAGCTA GGCCTCCAGG TGGTGGTCTA CGAGGTATAC CCTGCCTCTC CCAAGGATCT AACGCCACAA ATTCTGAAGG TTAAGCAGGC GGCGCCAGAC GTCATAATAG TTGCCTCTCA CTTCGCCGAC GGCCAGCTTG TGGTTAGGCA GTTGGCTGAG CAGAAGGTCG ACGCCAAACT CATCGCTCTG TCTGTGGCGC CTCTGGTGCC GGACTTCTAC AAGGCGCTGG AGACAAAGGC CGAGTGCGTC GTCGGCCCGT CGCACTGGGA GCCCGGCGTC ACCTACAGCC CGCAGCTCGC CAAGCAGAGA GGCGAGGATT GGTTTGGCCC CACGAAGGAG GAGTTCATAA CATATTTCAA GAAGGTGGCT AAGGAGATGG GCGGCAAGGA GGTGGAGCCG GGCTACCACG CCGCTTGGGC CGCCGAGGGG GTCTTGGCCA TACTATACGG GGTGCAGAAG GCCGCCTCGG CGGATTCAGA CAAGGTGCTC AACGCGTTGA GGAACTCCAG GTTTATGACC TTCTTCGGCG AGTTTAAGCT CGACCCGGCT ACGAATTTAA ACGTGGCACA TACAATGGTC GTCATCCAGT GGCAGGGCGG CCAGAGGGTC GTCGTCTGGC CTGCCGACGT CGCCGAGGGG AAGCTGGTCT ACCCCTCTCT GACGTGGGAT CAGAAAGCCG CCGGCCAACT CTGTAGATAA
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Protein sequence | MAVLGALAWI STQPSAPPTT SPAKQSPTTS SPVTSPTPSP TTSTPPQTTT QPPSVAKCPD EIVIGTAMPI SGRYAAEGQY SLWGALAVVN WINDRGGVDC GGKKVKVRLI YRDSESKLEL AQSITESLVT QDKVNFLLSP YGSDLALGVS PIAEKYGVLM AVVGASSDRI FQQGFKYVVG VAAPASQYMV PVLDMVVKRD PTAKKVAILY RDSEFNRQVA EGAKAYAEKL GLQVVVYEVY PASPKDLTPQ ILKVKQAAPD VIIVASHFAD GQLVVRQLAE QKVDAKLIAL SVAPLVPDFY KALETKAECV VGPSHWEPGV TYSPQLAKQR GEDWFGPTKE EFITYFKKVA KEMGGKEVEP GYHAAWAAEG VLAILYGVQK AASADSDKVL NALRNSRFMT FFGEFKLDPA TNLNVAHTMV VIQWQGGQRV VVWPADVAEG KLVYPSLTWD QKAAGQLCR
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