Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0955 |
Symbol | |
ID | 4616418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 848634 |
End bp | 849101 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639784053 |
Product | zinc finger TFIIB-type domain-containing protein |
Protein accession | YP_930474 |
Protein GI | 119872467 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.33185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTGTC CATATTGTAG ATCTGACAAA ATTATATTAA AAGACGGCGA ATACATCTGT ACAGAATGCG GAACAGTACT TGGTTTTGAA GTAGTCGCGC CCGTATCAAA GCAGAATATG TCAGTTATAA GAAGACGTAC TATATTTCTA AGTCTTGAAA AAGAAAACAA AAAAACTATC AATATGAAAT ATAGCGATAT AGTAAAATTT TATATTAATA AAATTTCTAC AGAACTAGCT ATAGAAAATA TTAGAGAGGT AGCATGGGAT CTATTTCAAA AGCTAGATAA AAGGGTCTAT CAGGGCAAAA ACCCTAGGGT GATAGCCGCC TCGGTTGTCT ACCTAGCCGC AGAGGCTATG GGGGTTCAGA TATACAAACA GACTATTGCA AAGATAGTAA ATATAAGTAA ATTTACTATT AGAGATACAG TTTCGAAATT AAGGAGACAT GTTTCTACTA CTCACTAA
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Protein sequence | MICPYCRSDK IILKDGEYIC TECGTVLGFE VVAPVSKQNM SVIRRRTIFL SLEKENKKTI NMKYSDIVKF YINKISTELA IENIREVAWD LFQKLDKRVY QGKNPRVIAA SVVYLAAEAM GVQIYKQTIA KIVNISKFTI RDTVSKLRRH VSTTH
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