Gene Pisl_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0955 
Symbol 
ID4616418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp848634 
End bp849101 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content34% 
IMG OID639784053 
Productzinc finger TFIIB-type domain-containing protein 
Protein accessionYP_930474 
Protein GI119872467 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.33185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGTC CATATTGTAG ATCTGACAAA ATTATATTAA AAGACGGCGA ATACATCTGT 
ACAGAATGCG GAACAGTACT TGGTTTTGAA GTAGTCGCGC CCGTATCAAA GCAGAATATG
TCAGTTATAA GAAGACGTAC TATATTTCTA AGTCTTGAAA AAGAAAACAA AAAAACTATC
AATATGAAAT ATAGCGATAT AGTAAAATTT TATATTAATA AAATTTCTAC AGAACTAGCT
ATAGAAAATA TTAGAGAGGT AGCATGGGAT CTATTTCAAA AGCTAGATAA AAGGGTCTAT
CAGGGCAAAA ACCCTAGGGT GATAGCCGCC TCGGTTGTCT ACCTAGCCGC AGAGGCTATG
GGGGTTCAGA TATACAAACA GACTATTGCA AAGATAGTAA ATATAAGTAA ATTTACTATT
AGAGATACAG TTTCGAAATT AAGGAGACAT GTTTCTACTA CTCACTAA
 
Protein sequence
MICPYCRSDK IILKDGEYIC TECGTVLGFE VVAPVSKQNM SVIRRRTIFL SLEKENKKTI 
NMKYSDIVKF YINKISTELA IENIREVAWD LFQKLDKRVY QGKNPRVIAA SVVYLAAEAM
GVQIYKQTIA KIVNISKFTI RDTVSKLRRH VSTTH