Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0938 |
Symbol | |
ID | 4616844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 834530 |
End bp | 835891 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639784036 |
Product | geranylgeranyl reductase |
Protein accession | YP_930457 |
Protein GI | 119872450 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.129052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA AATTTGACAT TGTAATTGCC GGCGCCGGCA CTGCGGGAGC TTACGCATCT TACCTTCTTG CAAAAAGCGG ATTTAGAGTG GCCTTGTTAG AATCTAAAAG TGGCAATGAG ATAGGAGTTA AGACTTGCGG CGATGGGCTA GGTCTTCACC ATGTGGAAAG GATGTCAAGA TACCTTACTC CGAACTCCAA GGTTTTTCAG AACAAAATAG AGGGCGTGGA GCTTATAAGC CCTGATGAAA AGACTAAACT GATAATTAAA GGAGAAGGCT ACGTCTTAGA TAGATTTGCC TGGGGTAGGT GGCTTGTGGA AGAGGCTATT AGAGCTGGTG CAACACTTTA TGAGGGGCAC ACGGCAACAT CTCCCATAGT TGAAAACGGC TCTGTAGTTG GAGTAAAGGC GGTAGAGAGG AAAAGCGGCA TTGTTAAAGA ATTTAGAGCT AAGGTTACTA TAGACGCCAC AGGAGCTGCC GCCGTTTTAA GAACTAAACT TTCAGGTTGG GCAGTCTCAG AGCCGTTGCA CCCAGAGGAT GTCTCACACG CATATAGAGA GATTGTGTAT GTAGAAGAGC CTTTGGAAAA TCCACAGTAT ATAAAGATAT ACCTAGATAT GGCAGTAGCT CCAGGCGGTT ATTGGTGGAT CTTCCCCCGT AACGCTACAA TGTTGAACAT CGGGCTGGGG ATCTGGGGGG TTTTGAGACG AAACCCTAGA GTTAACTATG AACAATACAT ATTGCCGCGG TTTAAAATTA GAGGCAAATA CCACATAGGC GGCGGCTTTA TCCCAACTAG GAGACCATTA AAGACTTTAG TTGGCAATGG AATTGTAGTA CTAGGCGACG CCGCTGCCGC AGTTAATCCA ATACATGGTG GCGGAATAGG GCAAGCTTTG CTCACTGCTG AGTTGGCCTC AAAAGCGATA ACAAAGGCTT TTGAAACCGG CGATTTTTCT GAAGAAACGC TGTGGGAGTA CAACTTGCTC TACATGAAGG AGTGGGGCTT TAGACAGGCA CAACTTGACG TGCTACGGCT TATGCTTCAG ACATTAGACA ACGACGACCT TAACTTCGGA CTTTCACGTA AAATATTAAA CGAAGACGAA ATTTACCACC TAGCCGCCAG GGGTACCGAT CTGTCACTGA TTGACAAATT TAAAGTGTTG ATGCAATTTG TCGGCAGACC TGCACTATTG AGAAAACTTA CTCTATCTAT TCAATATGCT AAGGAGATCG GAGATTTATA CCTAGCATAT CCAAGAGAGA AAGCAGAATT AGATAGATGG TATACACAAG TAGTTAATAA ATACAACGAA TACCGTAAAA AGATAGGGCT TGGGCCCTTG CCGACGGCGT AA
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Protein sequence | MVEKFDIVIA GAGTAGAYAS YLLAKSGFRV ALLESKSGNE IGVKTCGDGL GLHHVERMSR YLTPNSKVFQ NKIEGVELIS PDEKTKLIIK GEGYVLDRFA WGRWLVEEAI RAGATLYEGH TATSPIVENG SVVGVKAVER KSGIVKEFRA KVTIDATGAA AVLRTKLSGW AVSEPLHPED VSHAYREIVY VEEPLENPQY IKIYLDMAVA PGGYWWIFPR NATMLNIGLG IWGVLRRNPR VNYEQYILPR FKIRGKYHIG GGFIPTRRPL KTLVGNGIVV LGDAAAAVNP IHGGGIGQAL LTAELASKAI TKAFETGDFS EETLWEYNLL YMKEWGFRQA QLDVLRLMLQ TLDNDDLNFG LSRKILNEDE IYHLAARGTD LSLIDKFKVL MQFVGRPALL RKLTLSIQYA KEIGDLYLAY PREKAELDRW YTQVVNKYNE YRKKIGLGPL PTA
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