| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0896 |
|---|
| Symbol | |
|---|
| ID | 4617178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 800816 |
|---|
| End bp | 801700 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639783992 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_930415 |
|---|
| Protein GI | 119872408 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.122697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGACCTT CCGTAAGGCT GTGGCTTGCA TCTCTTTACC TCTTTATCAT GGGCACCATC
TCGTTGGCGT ATACACTAGT GGAGTTGCTA CTTGGCATAA TGTACAGCAG TCTTTTAGTC
ACTAGCGACG CTTTCCACGG CTTTATAGAT GCCGCTATAG CATATGTTTC TGGCTTTGGA
CTTTACTACG CATCAAAAAG AGGAAGATCT TTCCCCTGGG AGATCTACCG GCTGGAAAGC
TTGCTTACTC TACTCTCTGC GTTTGTAGTA CTCGGCTTTT ATACATATAT GTTAGTCACC
TCGATAAGAT TCGACAGCGA GCCGACGCCG CTGTGGATGA CCACCTTATT ACTAATTGGG
GGAGCTCTTA CATACCTCAT GTATCTATGG GAGAGGCGCA ACTATGACAT GCTCAAACTT
GAAATACTCC GGGCAGATGC GCTTCACGCC AAAATAGATG CCGCGTTGTC TATTGCGTCA
ACTATAGCTG TAGTTATAAG CAATATGTTC CACCTCATAG TTGCTGAAGT TATAGCAATT
ATTGTGATAT ATGGATATGT GATCTATGAA CTTGCTAGAC TTTCAAAAGA GGCAATGTAT
GGAATCTTAG GCGCGTTGTA TAGAGACCCA GTCCTTGAGG AAAAAATCAG AGAAATACTC
ATAGAGTTGG GGAAGCCTCT CGTTGTAAAA ATTAGGAGGG CAGGCAGTTT TCTCGTTGTA
TATTCACTAG TTGCAGTAAG TTCTGACATG ACTGTGGGGA AACTCCACAT GTTGAGAACC
AGAGCTATTA AGGCAATCTC GAGAACGCAT CCGCTTATTG TCCATGTGGA TGTAAAAATC
GTGCCGAGGA GATATAAACG TATTGAGAAG AGTCGGTATG CTTAA
|
|---|
| Protein sequence | MRPSVRLWLA SLYLFIMGTI SLAYTLVELL LGIMYSSLLV TSDAFHGFID AAIAYVSGFG
LYYASKRGRS FPWEIYRLES LLTLLSAFVV LGFYTYMLVT SIRFDSEPTP LWMTTLLLIG
GALTYLMYLW ERRNYDMLKL EILRADALHA KIDAALSIAS TIAVVISNMF HLIVAEVIAI
IVIYGYVIYE LARLSKEAMY GILGALYRDP VLEEKIREIL IELGKPLVVK IRRAGSFLVV
YSLVAVSSDM TVGKLHMLRT RAIKAISRTH PLIVHVDVKI VPRRYKRIEK SRYA
|
|---|
| |