Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0713 |
Symbol | radA |
ID | 4617625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 648443 |
End bp | 649435 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639783808 |
Product | DNA repair and recombination protein RadA |
Protein accession | YP_930234 |
Protein GI | 119872227 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR01954] transcription termination factor NusA, C-terminal duplication [TIGR02236] DNA repair and recombination protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.33185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTCTA AGAAGAGAAA AGATGCCGAG GTTGCTCAAG CCAGAGTGGA GATAACCCCC GACCTCGACG TAGAGGAACT TGAGGGCGTA GGGAGGGTGA CTGGCGCTAA GCTGAAGGAG AGGGGGTTCT TCACCGTTAG AGATGTGGCT TTTGCCTCTG TTAAAGAGCT GGCAGAGATT GTAGGCAATG AGGAGAGGGC ACAACAGATC GTGGAGGCGG CTAGAAAGAT GCTTGGTCTT CACTCATTTG TCTCGGCTCT TGAGGTTTAT GAGAGAAGAA AAAAGATTAG GCGTATATCC ACCGGCGTTA GAGCTCTTGA CGAATTACTA GGCGGAGGCA TTGAGACGCG TGCTGTGACC GAGGTGGCTG GGGAGTTCGG CTCTGGGAAG ACACAACTCT GCCACCAGCT CGCCGTCATG GTGCAGTTGC CCGAGGAGAG GGGCGGCCTC GGCGCAAAGG CCATATACAT CGACACCGAG AACACCTTCC GTCCCGAGCG TATAATGCAA ATAGCGAAGG CCAGGGGGCT AGACCCCGAC CAAGCCCTCA ACAACATCTT CTACGCCAGA GCCTACAGCT CAGACCACCA GATGATTCTA GTGGATCAAG CCAAGTCTAT AATTAGACAA CACAACGTGG CGCTTCTCAT CGTAGACTCC GTCATCGCCC ATTTCAGATC CGAGTTCCCG GGGAGGGAGA ACTTAGCCGA GAGACAACAG AAGCTAAACA AACACGTGGC TGACCTCCTG CGTCTGGCGG ACGCCTACGA CGTGGCCGTG GTGATTACGA ACCAGGTGAT GGCTCAGCCG GACGTCTTCT TTGGAAATCC GCTGAGGCCG GCTGGAGGCA ATATTTTAGC ACACGGCGCC ACTTATCGTC TATGGCTTAG AAAGTCTAAG GAGAACATCA GAATTGCAAA GATCTTTGAC AGCCCATATC ACCCAGAGGG CGAGGTCTCA TTTAGAATTA CAGAGGAGGG TCTTGTCGAC TAA
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Protein sequence | MSSKKRKDAE VAQARVEITP DLDVEELEGV GRVTGAKLKE RGFFTVRDVA FASVKELAEI VGNEERAQQI VEAARKMLGL HSFVSALEVY ERRKKIRRIS TGVRALDELL GGGIETRAVT EVAGEFGSGK TQLCHQLAVM VQLPEERGGL GAKAIYIDTE NTFRPERIMQ IAKARGLDPD QALNNIFYAR AYSSDHQMIL VDQAKSIIRQ HNVALLIVDS VIAHFRSEFP GRENLAERQQ KLNKHVADLL RLADAYDVAV VITNQVMAQP DVFFGNPLRP AGGNILAHGA TYRLWLRKSK ENIRIAKIFD SPYHPEGEVS FRITEEGLVD
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