Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0314 |
Symbol | |
ID | 4617944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 313572 |
End bp | 314276 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639783392 |
Product | ABC transporter related |
Protein accession | YP_929835 |
Protein GI | 119871828 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGA CTGTAAACTT AGAGGCAGGA TATGGAAAGC TACAAGTGTT ATTCGATGTA AATTTCGAGG CATTTCCGGG GGAGATAACC GCAGTACTAG GCCCAAATGG CTCTGGAAAA TCTACACTAC TTAAAGCAAT ATTCGGTATA GCAAGGGTAT ACAACGGCCG CATATACATA GGAGATAGAG ATGTGACAAA ACTTCCGACA CATGAGAGAG CGAGGCTGGG AGTTGCGTAC GTCTCCCAAC TTAGAAACGT ATTCTCCACA CTTACGGTAT TAGAAAACTT ACGTATGGCT GCCTATCAGA TGTCTAGCGT AGAGTTTGAA GAAAGGCTAA GAGAAGTCTC AGATATCGTG CCGCTTCGCG AAATTCTAAA TAGACGTGCC GGCGAGTTAA GCGGCGGTTG GAGACAGCTT GTGGCAATAG CTATGGCTCT TGTAAGACGT GCCACTATTT TTATGTTAGA TGAACCGACG GCACAACTAG CGCCTAAGAT GGCGAACCAA GTTTTGGACG TGGTTTTGAA ATTAAGAGAA GCGGGCTATA CTGTTGTTTT AGTAGAGCAA AATGCGAAAA AGGCGCTTGA GGTTTCAGAT AAAGCCTATT TATTAGTCAG CGGCCGCGTC CATTGGGTAG GCCCAGCAGA CAAACTTCTG GAGGAAAAAG AGTTGGGGAG ACTTTACCTA GGGTTTATTA AGTAG
|
Protein sequence | MIKTVNLEAG YGKLQVLFDV NFEAFPGEIT AVLGPNGSGK STLLKAIFGI ARVYNGRIYI GDRDVTKLPT HERARLGVAY VSQLRNVFST LTVLENLRMA AYQMSSVEFE ERLREVSDIV PLREILNRRA GELSGGWRQL VAIAMALVRR ATIFMLDEPT AQLAPKMANQ VLDVVLKLRE AGYTVVLVEQ NAKKALEVSD KAYLLVSGRV HWVGPADKLL EEKELGRLYL GFIK
|
| |