Gene Pisl_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0314 
Symbol 
ID4617944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp313572 
End bp314276 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content45% 
IMG OID639783392 
ProductABC transporter related 
Protein accessionYP_929835 
Protein GI119871828 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CTGTAAACTT AGAGGCAGGA TATGGAAAGC TACAAGTGTT ATTCGATGTA 
AATTTCGAGG CATTTCCGGG GGAGATAACC GCAGTACTAG GCCCAAATGG CTCTGGAAAA
TCTACACTAC TTAAAGCAAT ATTCGGTATA GCAAGGGTAT ACAACGGCCG CATATACATA
GGAGATAGAG ATGTGACAAA ACTTCCGACA CATGAGAGAG CGAGGCTGGG AGTTGCGTAC
GTCTCCCAAC TTAGAAACGT ATTCTCCACA CTTACGGTAT TAGAAAACTT ACGTATGGCT
GCCTATCAGA TGTCTAGCGT AGAGTTTGAA GAAAGGCTAA GAGAAGTCTC AGATATCGTG
CCGCTTCGCG AAATTCTAAA TAGACGTGCC GGCGAGTTAA GCGGCGGTTG GAGACAGCTT
GTGGCAATAG CTATGGCTCT TGTAAGACGT GCCACTATTT TTATGTTAGA TGAACCGACG
GCACAACTAG CGCCTAAGAT GGCGAACCAA GTTTTGGACG TGGTTTTGAA ATTAAGAGAA
GCGGGCTATA CTGTTGTTTT AGTAGAGCAA AATGCGAAAA AGGCGCTTGA GGTTTCAGAT
AAAGCCTATT TATTAGTCAG CGGCCGCGTC CATTGGGTAG GCCCAGCAGA CAAACTTCTG
GAGGAAAAAG AGTTGGGGAG ACTTTACCTA GGGTTTATTA AGTAG
 
Protein sequence
MIKTVNLEAG YGKLQVLFDV NFEAFPGEIT AVLGPNGSGK STLLKAIFGI ARVYNGRIYI 
GDRDVTKLPT HERARLGVAY VSQLRNVFST LTVLENLRMA AYQMSSVEFE ERLREVSDIV
PLREILNRRA GELSGGWRQL VAIAMALVRR ATIFMLDEPT AQLAPKMANQ VLDVVLKLRE
AGYTVVLVEQ NAKKALEVSD KAYLLVSGRV HWVGPADKLL EEKELGRLYL GFIK