Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0182 |
Symbol | |
ID | 4617994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 176433 |
End bp | 177200 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639783264 |
Product | ABC transporter related |
Protein accession | YP_929707 |
Protein GI | 119871700 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.356361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGA TTAGGGGTGT GAAGGTGAGG GCGGGGACCT TCGAGGTCCT CGCGGATGGG GCTGAGGTGG TGGGAAAGGC GGTGCTTCTG GGGCCCAACG GCTCTGGGAA AACCACCTTG TTGAGGGCTG TAAGCGGGGT GATCCCCTAC GAGGGTAGCA TCAAGATCGA CGGCGTTGAG GTGGACTCCG CCAGGGGGCT CCTCACAGTT TCGTCGAATC TCCCCGAGAT ATACCGTATT GCCTACGACG TGGCAGGGCT CCTGGAGGTG TTTGAGGACT TGAAGGGCGT TGACCGGGGC GAGTTCGAGG CCCTCATGGG GCGGTTGGGG CTGGGGCGCG AGGTCATGAG GAGGCCGGTG CACGCCCTCT CGGCCGGCCA GTGGTCTCTT GTGAGGCTCG CCCTCGCCCT GTCCTCTAGG CCGAAGACCA TCTTGGTGGA CGAGCCCTTC GAGAACGTGG ATCCCGCAAG GAGAGGCGCT GTGTTGAAGC TTCTAGTGGA GCGCGGGGAG TCTGGAATCG TCGCCACCCA CGACCTCGAC GCCCTCAAGG CCATGAGGGG CTGGGACGCC TACTTCATGC TGGAGGGCAG ACTCTACGGC CCCGTCCTAG TCGACGATCT GCTGGCCTCG GGGCTGGTCA GAGGGAGGGC CGGCGGCGCT CTTCTAACGC TTAAGGTCGG CGGCGTGGAG TACTCGGTAG TCAAGGGCGC CGGGGTTAAG TTCAGCGAGA TGGGCACGGT GAACAAGATC TACGGCCTGG TGGAATAG
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Protein sequence | MIEIRGVKVR AGTFEVLADG AEVVGKAVLL GPNGSGKTTL LRAVSGVIPY EGSIKIDGVE VDSARGLLTV SSNLPEIYRI AYDVAGLLEV FEDLKGVDRG EFEALMGRLG LGREVMRRPV HALSAGQWSL VRLALALSSR PKTILVDEPF ENVDPARRGA VLKLLVERGE SGIVATHDLD ALKAMRGWDA YFMLEGRLYG PVLVDDLLAS GLVRGRAGGA LLTLKVGGVE YSVVKGAGVK FSEMGTVNKI YGLVE
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