Gene Pisl_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0182 
Symbol 
ID4617994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp176433 
End bp177200 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID639783264 
ProductABC transporter related 
Protein accessionYP_929707 
Protein GI119871700 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.356361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGA TTAGGGGTGT GAAGGTGAGG GCGGGGACCT TCGAGGTCCT CGCGGATGGG 
GCTGAGGTGG TGGGAAAGGC GGTGCTTCTG GGGCCCAACG GCTCTGGGAA AACCACCTTG
TTGAGGGCTG TAAGCGGGGT GATCCCCTAC GAGGGTAGCA TCAAGATCGA CGGCGTTGAG
GTGGACTCCG CCAGGGGGCT CCTCACAGTT TCGTCGAATC TCCCCGAGAT ATACCGTATT
GCCTACGACG TGGCAGGGCT CCTGGAGGTG TTTGAGGACT TGAAGGGCGT TGACCGGGGC
GAGTTCGAGG CCCTCATGGG GCGGTTGGGG CTGGGGCGCG AGGTCATGAG GAGGCCGGTG
CACGCCCTCT CGGCCGGCCA GTGGTCTCTT GTGAGGCTCG CCCTCGCCCT GTCCTCTAGG
CCGAAGACCA TCTTGGTGGA CGAGCCCTTC GAGAACGTGG ATCCCGCAAG GAGAGGCGCT
GTGTTGAAGC TTCTAGTGGA GCGCGGGGAG TCTGGAATCG TCGCCACCCA CGACCTCGAC
GCCCTCAAGG CCATGAGGGG CTGGGACGCC TACTTCATGC TGGAGGGCAG ACTCTACGGC
CCCGTCCTAG TCGACGATCT GCTGGCCTCG GGGCTGGTCA GAGGGAGGGC CGGCGGCGCT
CTTCTAACGC TTAAGGTCGG CGGCGTGGAG TACTCGGTAG TCAAGGGCGC CGGGGTTAAG
TTCAGCGAGA TGGGCACGGT GAACAAGATC TACGGCCTGG TGGAATAG
 
Protein sequence
MIEIRGVKVR AGTFEVLADG AEVVGKAVLL GPNGSGKTTL LRAVSGVIPY EGSIKIDGVE 
VDSARGLLTV SSNLPEIYRI AYDVAGLLEV FEDLKGVDRG EFEALMGRLG LGREVMRRPV
HALSAGQWSL VRLALALSSR PKTILVDEPF ENVDPARRGA VLKLLVERGE SGIVATHDLD
ALKAMRGWDA YFMLEGRLYG PVLVDDLLAS GLVRGRAGGA LLTLKVGGVE YSVVKGAGVK
FSEMGTVNKI YGLVE