| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0125 |
|---|
| Symbol | |
|---|
| ID | 4616581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 116628 |
|---|
| End bp | 117581 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639783207 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_929651 |
|---|
| Protein GI | 119871644 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0195839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGC TAAAGGCCGC GTTAACCTCA CTTATTGCAG GCATTGCAGT AACTGCACTT
AAGATAACGG CGTGGCTACA GAGTTTTTCT GTGGCGGTGC TTGCAGACGC AGTCCACTCC
GCAGTTGATT TACTAGCGGT TGCTATTACA TATCTAGCAG TTAAAACTAG CGTAAAACCT
CCAGACGAAG AACACCCATA CGGCCACTAC AAAGCGGAGA CATTAGGCGG AATAGGTGGA
TCTCTAGCAG TAATGGCGTC TGCAACTTTT ATCGCATATG AGGCATTTAC AAGACTAGTG
CGGTGGGAGC CATATACGCC CAGCTTAGCT GGCGTTGTTA CAATGGCTAT AGCCATAGCG
GTAGATTTCA ATAGAGTAGT TGTCCTCCGC AAATTTAGAG GAGTTTCAAG AGCTCTCGAA
GCAGACGCCC TCCACTTCTC CACAGACCTT GCCTCATCTT CTGCCATACT TGCACTACTT
ATCTTCGGCG TAATTTCTGA AAAGTATGCG CCAGAAGTTT TCACACGTTG GAGCCCGGCG
ATAGATATCG CCTTAGCCAC CGCCATAACT ATATACTTCA TAAAGCTAAG TCTTGCACTA
CTTAAATCAT CTATAATTGA GCTATTAGAC TACGCCCCAC CTGATGTTGT TATAAAAACA
CGTCAACTTG TACAAAGAGT CGCCGGAGTA CAAGCTGTAA AGACTGTAAA AGTAAGAAAG
GCCGGCGGAG TATACCACGC CGATGTAACA ATAGCAGTAG ATGAAAATCT CACAGTTAAG
GAAGCTCACG AAATTGCAGA CCAGGTAGAG AAGACTCTAA AAGAAGAGCT AGGTGGAGAC
ATCGCCGTAC ACGTAGAGCC GCACAAGCCT AGCCAGAGGC CTGAGGAGAC TCCTTCAGCT
GCTTCTCGAT CTCCTCAAGA GCCTTCTGGA CCTCCTTCTC GATCTCCTCG ATAG
|
|---|
| Protein sequence | MDKLKAALTS LIAGIAVTAL KITAWLQSFS VAVLADAVHS AVDLLAVAIT YLAVKTSVKP
PDEEHPYGHY KAETLGGIGG SLAVMASATF IAYEAFTRLV RWEPYTPSLA GVVTMAIAIA
VDFNRVVVLR KFRGVSRALE ADALHFSTDL ASSSAILALL IFGVISEKYA PEVFTRWSPA
IDIALATAIT IYFIKLSLAL LKSSIIELLD YAPPDVVIKT RQLVQRVAGV QAVKTVKVRK
AGGVYHADVT IAVDENLTVK EAHEIADQVE KTLKEELGGD IAVHVEPHKP SQRPEETPSA
ASRSPQEPSG PPSRSPR
|
|---|
| |