Gene Ping_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3701 
Symbol 
ID4623381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4508580 
End bp4509200 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content43% 
IMG OID639798810 
Producttranscriptional regulator of TetR family protein 
Protein accessionYP_944976 
Protein GI119947296 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAC AGATCTGTAC TATTTTTGTT ACAATATTCG AGTTACCAGC CACTAGATTG 
GATTTTATTG TGTCAAAAAA GAAACAGCAA CTAATTGATA TTGCACTTAA TTTATTTATG
AGTGAGGGGT TTCATGCGAC CGGCATAGAC CGCATCGTAG AGGTTTCCGG CATTTCTAAA
ACCACTATGT ATCGTCACTT TGAATCAAAA GAGGTGTTAA TCAGAGATGC ACTACTTGTC
TTTAGTCAGC GCCAGCAGGC CGCTTGGGAG TTCGATGAGC CTCATCTATT GTCCGCAGAA
CAACTGATGC TTGCGCGTTT CGATGAGTTA GAGGCTTTGG TGCAGAGTAA GCATTTCTGT
GGTTGTGTGT TTCTCAACGC AAGCGCAGAG TACCCCGATG AAGAGAGCCT TATTCACCAG
GTAGCTATCG CCTACAAAGC AGCATCCCTC GCAGAAACCA AGCGACGCTT AGCCTCTATA
GAAGATAGTG ATAACAACCT CGCATTGACT ATCGAATTAA TTTACGAGGG AGTTGTCGCC
CGATTGCTGG TTCAGCAGGA TTTAGGCTTG ATTCAAACAG CTAAAAAAGT GGTGACTGCG
GTGCTTAAAT CAAAACCATA A
 
Protein sequence
MKLQICTIFV TIFELPATRL DFIVSKKKQQ LIDIALNLFM SEGFHATGID RIVEVSGISK 
TTMYRHFESK EVLIRDALLV FSQRQQAAWE FDEPHLLSAE QLMLARFDEL EALVQSKHFC
GCVFLNASAE YPDEESLIHQ VAIAYKAASL AETKRRLASI EDSDNNLALT IELIYEGVVA
RLLVQQDLGL IQTAKKVVTA VLKSKP