Gene Ping_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3485 
Symbol 
ID4625558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4312455 
End bp4314629 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content43% 
IMG OID639798601 
Productglutamine synthetase, type III 
Protein accessionYP_944767 
Protein GI119947087 
COG category[R] General function prediction only 
COG ID[COG3968] Uncharacterized protein related to glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.896622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.242716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGAA ACCAAAATCG CCTTAAAGCA ATTGAGAAAA TTACTAATCG TGCACCCAAT 
ATGGTCGACA AACCTGAGCC ATTAAGTAAA ATTTGGGCAG AAGACGTTTT TAATCTTCAT
AAAATGGAAG AAGCATTACC AAAAAATGCT TTTAAAGCGA TTAAAAAAAC GGTTCAAACT
GGCTGTGCTT TAGAGCCGGC AACGGCTGAT GTTGTTGCTG CAGCGATGAA GGATTGGGCG
CTTAGTAAAG GCGTTAAATT CTACTCACAT ATCTTTTACC CTATGACTAA CATTACCGCA
GAAAAGCATG ATGGTTTTAT TATTACCAAT TCTGATGGTG GTGCAATTAC TGAATTTACC
GGTAGCCTGT TAATCAAAGG GGAGCCAGAT GGTTCCTCTT TCCCTAACGG TAGCTTGCGT
ATGACTAATG CTGCCCGTGG TTATACCGCT TGGGATCCGA CCAGCCCTGC CTACGTTATG
CATACGGCTA ATGGCTCGAC TTTAATGATC CCAAGTGTGT TTATGTCCTG GACGGGTGAA
GCATTAGATA AAAAAATTCC ACTACTACGC TCAATTTCAG CAATGGACGA AGCCGGGCAA
AAAGTACTTA AATTAATGGG TGAGACTGAT ACCGCACCAC TTAATTCAAG CTGCGGCGCT
GAGCAAGAGT ACTTCCTCGT TGATGAAAAC TTTGCCAATG CACGCCCCGA TTTGTTACTT
GCAGGCAGAA CCTTATTCGG TGCTCCTCCC GCTAAAGGTC AACAATTTGA TGATCACTAC
TTTGGTGCAA TCCCTGAACG CGTTCAAGTG TTTATGCAGG ATTTTGAAAA CAAACTTTAC
AAGTTAGGTA TCCCGGCTAA AACTCACCAC AACGAAGTGG CTCCGGGTCA ATTTGAAATT
GCACCTTATT ATGAAGCGGC TAATGTCGCC GCCGATCATC AGCAACTTTT GATGACGGTG
ATGAAGAGCA CTGCAAAAGA GCATGGCTTT CTATGTTTAT TACATGAAAA ACCCTTTGCT
GGTATTAATG GCTCGGGTAA ACATGTTAAC TGGTCGGTGG GCAACAGCAC CCAGGGTAAC
CTGCTAGATC CAGGCAGCAC ACCACATGAT AATCTTAATT TCTTACTTTT CTGCGGTGCC
GTTATTCGCG GTGTGCATAA ATATGGCCCG TTATTACGCG CTGTTATTGC ATCAGCTTCT
AACGACCACC GGCTTGGTGC TAACGAAGCA CCACCGGCTA TTCTTTCTGT TTATTTAGGC
GAGCAGTTAG AAGGGCTATT TAATGACATT AAAAATGGCA AGCTGTTAAC TTGTGCTGAT
GCCGGTTTAA TGGATTCTGG TTTATCGCAA ATCCTGCACT TTGAACGAGA TCCGGGTGAC
CGTAACAGAA CCTCTCCCTT TGCATTTACA GGTAACCGTT TTGAGTTCCG CGCTGTTGGC
TCATCACAAT CAGTATCTGG TCCATTGGTT GCTATGAATA CAATGCTTGC TGATTCATTA
AACTGGATTG CTGAAAAGTT AGAAGTGGCT TTAGCAGAAT CTGAGAACCA AAATATTGCC
GTTATATCTG TATTAAAAGA ACTAATGGAA CTGCATGGCA ATATTGTATT TGGTGGTGAC
GGTTACTCGA AAGAATGGCA CACAATGGCG GTTGAAGAGC GTGGTTTACA AAATATTCCA
ACAACAGCCG ATGCCTTACC TGCATTTCGT GAAGAGTCAA TCGTTAAACT TTTTGAAAGC
ACTGGGGTAT TCTCACCCAT TGAATTAGAA AGCCGCTATC AAGTTTATGC TGAGCAATAC
ATTCTTTCGA TTGAGGTAGA AGCTAAATTA GTGATTGATA TGGCAACGAC CACTATTTAT
CCTGCTGCTA TGAGTTACTT ATCACAGCTT GGTCTAACGA CTTCGACAAT GATTGGACTC
GATATCGCGC TTGATACTTC GCTCACATCT GAAATCGCAG TTGAGACCAA TGCGCTTATG
ACAGCTGTCA CTAAACTTAA ACAAGCAGTC GCAACACATG ACTTTGTCGA TGTAGAGGCG
CATATGCATT TCTGTGCTGA TGTTATTCGT GGCTTAATGG ATCAAACACG CGAGCACGCT
GATGCGCTTG AAACACTTGT TGCCGATGAA TTATGGCCGT TGCCTAAGTA TCAGGAAATG
TTATTTATCA AATAA
 
Protein sequence
MSGNQNRLKA IEKITNRAPN MVDKPEPLSK IWAEDVFNLH KMEEALPKNA FKAIKKTVQT 
GCALEPATAD VVAAAMKDWA LSKGVKFYSH IFYPMTNITA EKHDGFIITN SDGGAITEFT
GSLLIKGEPD GSSFPNGSLR MTNAARGYTA WDPTSPAYVM HTANGSTLMI PSVFMSWTGE
ALDKKIPLLR SISAMDEAGQ KVLKLMGETD TAPLNSSCGA EQEYFLVDEN FANARPDLLL
AGRTLFGAPP AKGQQFDDHY FGAIPERVQV FMQDFENKLY KLGIPAKTHH NEVAPGQFEI
APYYEAANVA ADHQQLLMTV MKSTAKEHGF LCLLHEKPFA GINGSGKHVN WSVGNSTQGN
LLDPGSTPHD NLNFLLFCGA VIRGVHKYGP LLRAVIASAS NDHRLGANEA PPAILSVYLG
EQLEGLFNDI KNGKLLTCAD AGLMDSGLSQ ILHFERDPGD RNRTSPFAFT GNRFEFRAVG
SSQSVSGPLV AMNTMLADSL NWIAEKLEVA LAESENQNIA VISVLKELME LHGNIVFGGD
GYSKEWHTMA VEERGLQNIP TTADALPAFR EESIVKLFES TGVFSPIELE SRYQVYAEQY
ILSIEVEAKL VIDMATTTIY PAAMSYLSQL GLTTSTMIGL DIALDTSLTS EIAVETNALM
TAVTKLKQAV ATHDFVDVEA HMHFCADVIR GLMDQTREHA DALETLVADE LWPLPKYQEM
LFIK