Gene Ping_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3381 
SymbolrecA 
ID4625669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4176925 
End bp4178001 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content42% 
IMG OID639798497 
Productrecombination protein RecA 
Protein accessionYP_944666 
Protein GI119946986 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000385109 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG ATAAAAACAA AGATAAAGCA TTAGCCGCAG CCCTTGGACA AATTGAAAAA 
CAATTTGGTA AAGGTTCAAT CATGCGTTTA GGTGATGATG CAGCATCGAT GGAAATTGAT
TCTGTTTCAA CTGGCTCATT AAGTTTGGAT GTTGCGTTGG GTATAGGTGG CTTGCCCTAC
GGCCGTTGTG TTGAAGTTTA TGGTCCGGAG AGTTCGGGTA AGACAACCCT AACCTTACAA
GTTATTGCCG AAGCGCAAAA ACAAGGTAAA ACCTGTGCAT TTATTGATGC CGAACATGCA
CTTGATCCGA CTTATGCCAA AAAACTCGGC GTGGATGTTG ACAACCTGCT TATCTCTCAG
CCGGATACCG GTGAGCAAGC ATTAGAAATC TGTGACATGC TGGTGCGCTC TGGTGCAGTA
GGTGTGGTGG TGGTAGATTC CGTTGCCGCG TTAACACCTA AAGCTGAGAT TGAAGGCGAT
ATGGGTGATT CACACATGGG TCTGCAAGCA CGTTTAATGT CGCAAGCATT ACGTAAATTA
ACCGGGAACA TCAAACAGAC CAATACTATG GTTATTTTCA TTAACCAAAT CCGCATGAAG
ATCGGTGTTA TGTTTGGCAA TCCCGAAACG ACTACGGGTG GTAATGCGCT TAAGTTCTAT
GCTTCTGTTC GTTTAGATAT CCGCCGTATT GGCGCGATTA AAAACGGTGA AGAAATTATT
GGTAATGAAA CACGCGTAAA AGTGGTTAAA AATAAAGTCG CGCCACCTTT TAAGCAAGCA
GAGTTTCAGA TTCTATATGG TAAAGGTATT AACCATTTCG GTGAGTTGGT TGACTTAGGT
GTTAAACAAG AGTTTGTTGA AAAAGCGGGT TCTTGGTACT CGTACAATGG TGCTAAAATT
GGTCAAGGTA AGAGCAATGC AAGCCAGTAT TTAAAAGATA ACCCGGCATC AGCCGAAGAG
CTTGAAGCTA AAATTCGCGA AGCGTTAATG CCGAAAGCAG AAGTCATTGA AGATAAAAAA
ATAATTGCAG AGAAAAAAGT AACTGAAGAT AAAAAAGTAA CTGCCTCAGA GGGTTAA
 
Protein sequence
MSQDKNKDKA LAAALGQIEK QFGKGSIMRL GDDAASMEID SVSTGSLSLD VALGIGGLPY 
GRCVEVYGPE SSGKTTLTLQ VIAEAQKQGK TCAFIDAEHA LDPTYAKKLG VDVDNLLISQ
PDTGEQALEI CDMLVRSGAV GVVVVDSVAA LTPKAEIEGD MGDSHMGLQA RLMSQALRKL
TGNIKQTNTM VIFINQIRMK IGVMFGNPET TTGGNALKFY ASVRLDIRRI GAIKNGEEII
GNETRVKVVK NKVAPPFKQA EFQILYGKGI NHFGELVDLG VKQEFVEKAG SWYSYNGAKI
GQGKSNASQY LKDNPASAEE LEAKIREALM PKAEVIEDKK IIAEKKVTED KKVTASEG