Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3330 |
Symbol | |
ID | 4625744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 4114192 |
End bp | 4115349 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798440 |
Product | ABC-type uncharacterized transport system, periplasmic component |
Protein accession | YP_944616 |
Protein GI | 119946936 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.430649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAAA AAAAACAAGG CATTTTTATC TGGTTAGTAC TGTGCTGCAG TGTTCTGACA GCGAGTGTCA GTGCTGAGAA TTTCAGCACT CGTCCGCAAG CTAAGCCAGA TAAACCTTGG CGTATCGCAT ACTATCAGGG CGGTGAGTAC GTATCTTATT ATGATTATTT GTATGCAACG GCCAAAGGTC TGAGCCAGTT AGGTTGGATT GAACCATTTT ATCTACCTGA CTTTCCCAAT AAAGATACCC GCAAATTGTG GCAGTGGTTG TCGAATAATA TTAACAGCGA GTATTTGGAG TTTGTTGCTG ATGGTTACTT TTCAGCCGGC TGGGACGAGA TTGTTCGGAA AAAAGTGCGT AACAGCCTGA TCGCAAGGTT CAATCATAGC AAGGATATTG ATATGGTGTT TGCTGTTGGG ACTTGGGCAG GGCAGGATCT GGCCAATAAT CTTCATCATG TACCTACTGT TGTAATTTCT ACTTCTGATC CCCTGCGTTC AGGCATTATT CATACATCTG ATGATTCTGG TTATGATCAT GTCTTTGCCA GTTACGATCC TAGTCTTCTA TCACAACAGA TACAGGTTTT TCATGAGCTG ATCGAATTTA AAAAATTGGG CGTGCTTTAT GAAAATACCC TCAGTGGCAG AAGCTATGCG GGTATGGATT TGATTGAACA GGTCTCGGCT GAACTGGAAT TTGAAATAGT GCCTTGTTAT ACCCAAAGTG ATATTGCCGA TCAACAGCGG GCGGATCAGA GTGTTCTAGA GTGCTTCAAT AAACTGGCAC AGAAAGTTGA TGCTATTTTT GTTTCTGCTC AAGGGGGAGT AAACGCTAAA AGCATTCCCA AGCTTGTAAA GATTGCTAAT CGCTACGGTA TTCCAACATT CGCACAGAAT GGAGAACAGG AAGTGCGTTA TGGCTTACTG TTAAGTCTGA TCCCGCGCTC GGGAATCGGA CCTGAAGGGC TGTTTGTGGC TGATAATGTT GGGAAAATCA TTAACGGCGC TATACCGCAC AATTTGAAAC AGCGCTTTGA AGGGTCCTTC AGTGTGGTCA TGAATATGAA AACCGCGGAA AAAATAGGTC TGTATGTCAA TGCCGACCTG CTTGCTGCAG CGGATAAATT ATACTGGCAG ATTGAGATTC CACAATGA
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Protein sequence | MRKKKQGIFI WLVLCCSVLT ASVSAENFST RPQAKPDKPW RIAYYQGGEY VSYYDYLYAT AKGLSQLGWI EPFYLPDFPN KDTRKLWQWL SNNINSEYLE FVADGYFSAG WDEIVRKKVR NSLIARFNHS KDIDMVFAVG TWAGQDLANN LHHVPTVVIS TSDPLRSGII HTSDDSGYDH VFASYDPSLL SQQIQVFHEL IEFKKLGVLY ENTLSGRSYA GMDLIEQVSA ELEFEIVPCY TQSDIADQQR ADQSVLECFN KLAQKVDAIF VSAQGGVNAK SIPKLVKIAN RYGIPTFAQN GEQEVRYGLL LSLIPRSGIG PEGLFVADNV GKIINGAIPH NLKQRFEGSF SVVMNMKTAE KIGLYVNADL LAAADKLYWQ IEIPQ
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