Gene Ping_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3300 
Symbol 
ID4625750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4070422 
End bp4071378 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content41% 
IMG OID639798410 
Productiron and zinc efflux system protein 
Protein accessionYP_944586 
Protein GI119946906 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.831799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0946092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAAAA ATCTCAAAAA AGAAGAGTAT AACCGATTGG TTAACCTTGC CGGACGGGCT 
GCTATTTTCG CCGCCTCTTT GCTGATTCTC GTTAAATTAA TTGCCTGGGT GATGACCGGC
TCTGCCAGTA TTTTAGCCAC CCTGACCGAT TCGTTAATGG ATGTCACTAC TTCTATTATC
AATCTGTTAG CGATTAAGAT AGCCCTTCAA CCTGCCGATG ATGAACACCG TTTTGGTCAT
GGTAAAGCAG AGAGTCTTGC CGGGCTAGCA CAAGCCGCCT TCATTTCTGG TACGTCTATG
TACTTGATGT TTAATGGTAT TTCTGCTTTG GTTAACGGAC ATCAAATAAG TGCAACAAAT
GTTGGCATTG GGGTAATGAT TTTCTCTGTT ATCGTCACTA TTTTATTGGT TGCATTTCAA
AGCTATATTG TGAAAAAAAC AGATAGCATG GCAATTAGAG CCGATTCACT GCATTACCGG
ACCGATATTG CCATGAATGG CGCGGTATTA TTGGCGCTTA TATTGGCCGG GTACGGCTGG
TATTGGGCTG ATGGTGTATT TGCGATTGCG GTTAGTTTTT ATATTTTACA TGGCGCATGG
CAGATTGGCC GTTTGTCAAT TGATGCTCTG ATGGATAAAC AACTGCCTAA ATCTGATGAA
GAGAAAATTG TAAAAACTGC CTATCATATC AAGGGGGTGC GTGGTGTTCA TGATTTACGA
ACCAGATTAT CGGGTAATAC AAAATTCATT CAGCTACACT TGGAACTTGA TGATAATCAA
AGCTTATTAG AAGCGCATAA CAAAGCGGAT CAGTTAGAAG AGGCGTTAGA GTCTGATTTC
CCTCGCGCAG ATATACTCAT CCATCTGGAT CCTTTGTCGA TAGTTGAGGA AGAAAAATTG
AACGACAAAT TACAATTTGA AACATCGCCA GTTACCTCGG ATAAGGACAA TATTTAA
 
Protein sequence
MSKNLKKEEY NRLVNLAGRA AIFAASLLIL VKLIAWVMTG SASILATLTD SLMDVTTSII 
NLLAIKIALQ PADDEHRFGH GKAESLAGLA QAAFISGTSM YLMFNGISAL VNGHQISATN
VGIGVMIFSV IVTILLVAFQ SYIVKKTDSM AIRADSLHYR TDIAMNGAVL LALILAGYGW
YWADGVFAIA VSFYILHGAW QIGRLSIDAL MDKQLPKSDE EKIVKTAYHI KGVRGVHDLR
TRLSGNTKFI QLHLELDDNQ SLLEAHNKAD QLEEALESDF PRADILIHLD PLSIVEEEKL
NDKLQFETSP VTSDKDNI