| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2884 |
|---|
| Symbol | |
|---|
| ID | 4626220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3563863 |
|---|
| End bp | 3564477 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639798004 |
|---|
| Product | ABC-type transporter periplasmic protein |
|---|
| Protein accession | YP_944187 |
|---|
| Protein GI | 119946507 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.202462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTATT TATTAATGGT AATGACACTG CTTTTTTCAG GTGGAGTATT TAGTGATGAA
ATAGATATGA GTAACCCAAA TAAGGTTATT CAATCTGTAT CAACTAAGAC ATTTGCTAGA
ATTACGGCTG AGGAAGCTCG TTTAAAAACG GAGCCCGATT ATATAAAAGT GGTCATTGAA
GAGGAGTTAA TTCCTTATTT TGATTATAAG TACGCAGCTT ACAAGGTATT GGGAGCACAT
TTAAGAGACA CCACTGTTGA TCAGCGTAAT GAATTTGTTG AAGTCTTCCG ACTCTATTTG
ATTAACTCCT ATAGCAATAT TTTATTCAAA TATGATCAAC AAGAGATAGA GATATCCGCT
AATACGAACT TTAAAAATGC GAATATAGTG ACCATTCCGG TTAGGATTCG GAGTAAAGAT
GGTCAAGTAG CTCAATTGAG TTTTAAACTG CGGGAAAATC AAAAATCCGG GGAATGGAAA
GTGTTTGATG TTATCGCAGA GGGGATCAGC ATGTTAAATA CTAAGCAGTC AGAGATAAGT
GAACTTATTC AAAGAGAAGG TATTGATCAT GTTATCAAAT TGCTAAAAAA GAAAAATAGC
GAGTTTTCCT CGTGA
|
|---|
| Protein sequence | MRYLLMVMTL LFSGGVFSDE IDMSNPNKVI QSVSTKTFAR ITAEEARLKT EPDYIKVVIE
EELIPYFDYK YAAYKVLGAH LRDTTVDQRN EFVEVFRLYL INSYSNILFK YDQQEIEISA
NTNFKNANIV TIPVRIRSKD GQVAQLSFKL RENQKSGEWK VFDVIAEGIS MLNTKQSEIS
ELIQREGIDH VIKLLKKKNS EFSS
|
|---|
| |