Gene Ping_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2719 
Symbol 
ID4625898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3335075 
End bp3335602 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content38% 
IMG OID639797842 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_944028 
Protein GI119946348 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.159423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA ATAAAGTTTT AATTGCTTTA ATTAACCCTA AAAGCCCGAC AAATGTGGGT 
GCTGTGATGC GCGCGGCCGG ATGTTATGCG GTTGATGGCG TTCTATATAC CGGCAATCGT
TATGCTCTCA CAATGAAACT TAAGACAGAT ACCAAAAATA TCAGCGCGAC GATCCCTTTA
AGGAACGAAC CAGATTTACT TAATAATTTA TCTGAAAATT ATTCGAATAA TGATATTAAA
GTGGTTTGTG TTGACCTGAT TGAGGGAGCA ACGCCCCTGC CTAATTTTAT ACATCCTGAA
AAAGCATTAT ATATTTTTGG CCCTGAAGAC GGCACCATTA AACAGTCGGT AGTAAACCAG
GCTGATGCGG TTGTTTATAT CCCTACTATT GGCTGTCTGA ATCTCGCAGC GACGGTTAAT
GTTGTACTTT ATGATCGCCT GGCAAAATCG ACAAAACATA TTACCGATAA TGAATTAATT
AAAAAAAGCA GAGACAATAA TAATAGAGTG AAAGTGAAAT CTATTTGA
 
Protein sequence
MAKNKVLIAL INPKSPTNVG AVMRAAGCYA VDGVLYTGNR YALTMKLKTD TKNISATIPL 
RNEPDLLNNL SENYSNNDIK VVCVDLIEGA TPLPNFIHPE KALYIFGPED GTIKQSVVNQ
ADAVVYIPTI GCLNLAATVN VVLYDRLAKS TKHITDNELI KKSRDNNNRV KVKSI