Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2490 |
Symbol | |
ID | 4623523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3046173 |
End bp | 3049436 |
Gene Length | 3264 bp |
Protein Length | 1087 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639797622 |
Product | helicase DEAD/DEAH box |
Protein accession | YP_943816 |
Protein GI | 119946136 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0540271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0731117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATAA TAGATAATAT AAATAGCCTA CTCGGTGATG ATTTGAAACA AACCATTACT TCTGGATCAA AGTTAAAAAT CGCAGCCTCA TGCTTTTCAA TATACGCATT TGAAGCTCTT AAAGAGCAGC TAGAGCAGGT AGATTCGTTA GAATTCATAT TTACATCACC TACATTCGTT GAAATTGAAG TTACTGATAA TTTACGTAAA GAAAAGCGTG AATTTCATAT ACCACGTGAA CAAAGAGAAC GAGGTTTTTA TGGGTCAGAA TTCGAAATTC AACTAAAAAA TAAGTTAACG CAAAAAGCGA TAGCTAAAGA ATGTGCTGAT TGGATCCGTC GTAAAGCAAA CTTTCGATCA AATGCGACCA GCGCATCAAT GCAGCAATTT GCCGGTGTTA AAAAAAATAT AAATGAATCT GTCTATATGC CTTTACAAGG ATTTACTGCC GTTGATATTG GCTATCAAAA GGGCGATGCA GTTTCTAATA TAGTTAATCG CATTGATGAA CAGCCTATTA CTTCTATTTA CCTAAATTTG TTCGACCAAA TCTGGACCGA TAATGAAAAG GTTGAAGATG TAACCGATAG ACTTATAAAT CATATATCCT CGGTTTATCA AGAGAATGCC CCTGAACGTA TCTACTTTCA GTTGCTGTAC AATATATTTA ATGAATTTTT GAAAGATATA AATGAAGATG TACTTCCTAA TGATAAAACA GGTTACCAAG ATAGCCTTAT ATGGAATAAA CTATTTAATT TTCAGAAAGA TGCCGCAACA GGTATCATAA ATAAACTTGA AACATTCAGC GGTTGTATTT TGGCTGACAG TGTTGGTTTG GGTAAAACCT TTACTGCACT TGCCGTGGTG AAATATTACG AGCTCAGAAA TAAATCCGTA TTAGTTTTAT GTCCAAAAAA ACTTGCAGAT AACTGGTTAA ACTTCAATAG AAACCTAACT ACCAATCCAT TCATCAAAGA TCGCTTTAAT TTCGATGTAC TCTGCCATAC AGACATTCAA CGTACACGTG GTGAATCTTT TGGTATCCCC ATGAATCGCA TTAACTGGGG AAATTATGAC TTAGTAGTTA TTGATGAGTC ACATAATTTT CGTAATAATC AAGTCTACAA AGATAAAGAA ACTCGCTATC AAGCTTTAAT GAATAAAGTG ATGCGCACAG GTGTTAAAAC TAAAGTACTG ATGTTATCAG CAACGCCTGT TAATAATCGT TTTTCAGATT TGCGAAACCA ATTAGCTTTA GCTTATGAAG GTGAATCTGA AAAAATACGC CAACAAGTAG GTACTCAGCG TAGTATTGAA GAAATATTCA AACGAGCTCA AAAATCATTT AATGAATGGG TTGATTTAGA GTCAGAGCAA AGAACTGCGA ATGCGTTACT TGATTCCTTA GATTTTGATT TTATTAAATT GCTAGATAGC GTCACCATTG CCAGATCACG TAAACACATT CAAACATTTT ATGACATTTC AGAGATAGGC CCTTTTCCAG AACGCAGGAA GCCACTATCA TTTCATCCCC CATTAACAAC TAGAACCGAT GTGATAGGTT TTAATCAAAT ATTTGAGCGG TTATCAAGTT TGAAAATGGC TGTCTATGCG CCAATAAGTT ATATCTTACC GAGCCGTATT GCTAAGTATG AAGATATGTA TGACACCCAA GTAGGTGGGA AAGGTACGCT AAGGCAAGCC GACCGTGAAA AAGCACTACA GCGTTTAATG ACCATCAACC TACTTAAACG TTTAGAAAGT TCAGTTCATG CATTTCGACT AACCCTAACA GGATTAAAAA ACACTCTCGA AACGGCGCTT AACAATATAG ATTCATTCAA ACGCAGCGGT ATCGATCAAG GATTTGATGA TATAGCTGAC GAGTTTAATG GCTTAGATAC AGAAGATGAC TTTGATGATT TTGATAAATC CTTTTCAACA GGGGGGAAAG TTAAAATTGA TCTGGCGGAC ATGGACATTG AGTCTTGGCA GCATAATCTT GTTGAAGACC TAGAAACTAT CATTAAATTA TTTGATGAGA TGATGAAAGT AACCCCTGAA CATGATGCCA AGCTTCAGCA TATCAAAGAA CAAATCAAAC AGAAATGGGC TCATCCCATT AATATTGGTA ATAGTAAAGT ACTAATATTT ACTGCTTTTG CGGATACGGC TAATTACCTA TACGATAATA TTGCGCCTGA ATTTTATAAC CAGTATCAAG TCCATACGGG TAAAGTTACA GGTAGTAGCC CTATAAAAAC AACCATAAAT AAAAATTACG ACTTTCAAAG TGTATTAACT CTGTTTTCTC CGATAGCGAA AGAAAAAGCT CAAGTATTAC CTAGTGAAAC TGCTGAAATT GATATTCTCA TTGGTACTGA CTGTATATCT GAAGGTCAAA ATTTACAAGA TTGTGATTGT GTAATGAATT ACGACATTCA TTGGAATCCA GTTCGTATTA TTCAACGTTT TGGTCGAGTT GATCGTATCG GTTCTAAAAA TACAGAGATA CAACTGATTA ACTACTGGCC GGATATAAGT TTAGACGAAT ACATAAACCT AAAAGAGCGT GTCGAAAATC GTATGGTTAT TTCTGATATT ACGGCCACGG GTGACGACAA TGTATTAAAA GCCGAAGCCA ATGACGTTGC TTACAGAAAA GAGCAATTAC AACGGTTACA GGAAGAAGTT ATTGATTTAG AAGATGTTAA AACAGGTGTG TCAATCACTG ATTTAGGGTT AAACGAATTC AGAATGGATT TGGTTAATTA CATCAAAACA AACGGAGAGA TTAAGTCTAC GCCGAATGGT TTGCATACAG TAGTCAATTC AGATCCAAGT GTCGGCTTAG TACCAGGCGT TATATTTGCC CTGCGTAACC GCAACCATAG TCTTAATATC GACCAGCAAA ACAGATTACA TCCTTATTAT TTAATTTATA TTGCTACCAG TGGTGAAGTG GTTATTAATC ATATGCAAGT TAAGCCCTTA CTTGATAGAG TACGAGCTGC CTGTAAAGGC AAGTCCGAAC CGATTAAATC TGCATATGAC GCTTTTAATA GTGTGACTAA AGATGGCAAA GAAATGAATT TTTACTCTAA TTTACTAGAA CAATCGATTA GCTCAATGAT TAAAGTAAAA GAGAGTAGTG ATATTGATAG CTTATTTGGC GGTAAAATGA CATCGGCATT AACTAATGAA ATATCTGGAT TAGATGATTT TGAGCTAATC AACTTCATTG TAGTGAATGG TTAA
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Protein sequence | MEIIDNINSL LGDDLKQTIT SGSKLKIAAS CFSIYAFEAL KEQLEQVDSL EFIFTSPTFV EIEVTDNLRK EKREFHIPRE QRERGFYGSE FEIQLKNKLT QKAIAKECAD WIRRKANFRS NATSASMQQF AGVKKNINES VYMPLQGFTA VDIGYQKGDA VSNIVNRIDE QPITSIYLNL FDQIWTDNEK VEDVTDRLIN HISSVYQENA PERIYFQLLY NIFNEFLKDI NEDVLPNDKT GYQDSLIWNK LFNFQKDAAT GIINKLETFS GCILADSVGL GKTFTALAVV KYYELRNKSV LVLCPKKLAD NWLNFNRNLT TNPFIKDRFN FDVLCHTDIQ RTRGESFGIP MNRINWGNYD LVVIDESHNF RNNQVYKDKE TRYQALMNKV MRTGVKTKVL MLSATPVNNR FSDLRNQLAL AYEGESEKIR QQVGTQRSIE EIFKRAQKSF NEWVDLESEQ RTANALLDSL DFDFIKLLDS VTIARSRKHI QTFYDISEIG PFPERRKPLS FHPPLTTRTD VIGFNQIFER LSSLKMAVYA PISYILPSRI AKYEDMYDTQ VGGKGTLRQA DREKALQRLM TINLLKRLES SVHAFRLTLT GLKNTLETAL NNIDSFKRSG IDQGFDDIAD EFNGLDTEDD FDDFDKSFST GGKVKIDLAD MDIESWQHNL VEDLETIIKL FDEMMKVTPE HDAKLQHIKE QIKQKWAHPI NIGNSKVLIF TAFADTANYL YDNIAPEFYN QYQVHTGKVT GSSPIKTTIN KNYDFQSVLT LFSPIAKEKA QVLPSETAEI DILIGTDCIS EGQNLQDCDC VMNYDIHWNP VRIIQRFGRV DRIGSKNTEI QLINYWPDIS LDEYINLKER VENRMVISDI TATGDDNVLK AEANDVAYRK EQLQRLQEEV IDLEDVKTGV SITDLGLNEF RMDLVNYIKT NGEIKSTPNG LHTVVNSDPS VGLVPGVIFA LRNRNHSLNI DQQNRLHPYY LIYIATSGEV VINHMQVKPL LDRVRAACKG KSEPIKSAYD AFNSVTKDGK EMNFYSNLLE QSISSMIKVK ESSDIDSLFG GKMTSALTNE ISGLDDFELI NFIVVNG
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