Gene Ping_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2386 
Symbol 
ID4624039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2903132 
End bp2904919 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content30% 
IMG OID639797524 
Productsignal transduction protein 
Protein accessionYP_943722 
Protein GI119946042 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.76685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATG ATATTATTAA AAAAGCAACG GGTGGACTTG ATGGCTTAGT CGATGACTTG 
GTTAAGTCTG CAACAGGAAA AGTTAAAGAG AAGATTTCTG AAGCTTTTGC AATTAATAAA
CTTCAATATT TTAAAGATAA TGTTGCTCGT ATAGGTCAAG TAAAAACAAT ATTACATCCT
GATTCTATCG TACATTTAAC TGATATATTT TTTGATCAGG CAGTTTTATT TAATGATGAA
TATATAGAAT CATTTAGTCA ATTTGGCGAT AAACAAGTTT TAGTTGAGGG AGGGCCAGGA
CAAGGTAAAT CTTTATATCT GAGAAAACTG TGTTTAAAAG AAGGTACTGG GAATTCTTAT
ATTCCTATTT TTATTGAGTT TAGGAATCTC AGGTATAAAA ATAAGCTTAA AGAGGAAATA
ATGGATGCTA TAGAAGATTT AGGTGTCAAA TTAGACAATA CTCTTTTTGA CTTTCTAGCT
AAATCAGAAA AAATACTATT ACTCTTAGAT GGATTTGATG AAGTTCCTAA TAATGAAAGA
AAAAGAGTTG CACGAGAACT CGAAACAATA GTTCGCACGT ATCCAAAACT ACGAGTAGTT
ATATCATCTA GACCTGATTC TGGTATGGGC TCATCATTTT ATTTTTCTAA AAAAAAGATT
AGTCCCATGA CATTAGTAAC ACAACAAGAT TTTGTGAAGC ATCTATATAA GGCGGATAGA
CAATCAGAAA GTATAAATAA TATATTATCT AATAGTAGTT TTATTTCAGA AATTACAACC
ACTCCACTGT TACTCACATT ATTTACAATC ACATATAATA CGCGTCAGTT CAAACCAGAT
AGTCTAGCTG AATTTTACAG CCTAATATTC CCTACTATGC TTTATCGCCA TGACAGAATG
AAGATCGGTT TTGAGCGAGA AAGAAAAGCA GGGCTAACTG ATTATCAGAT GCAGCGTTTA
TTTGATTCAA TCAGTTTTTT ATCTCTTCAT GATAACAACA CTCGGTTTCC TGTATTGCAA
TTTCAAGGTT ATCTCGAAAG AGCAGCAAAA CTTGAAAGAT TACCTGAGAA TATTGAAGAT
CTTCTTATTG ATGATATTAC TAGCATAACT GCATTGATAA TCCGAGATGG ATTTAATTAT
TTCTCATTTA CTCATAAAAG TATTCAAGAA TATTTTGCTT CCGTCTTTAT TTTTCGATTG
CCTGAAAGTA GAAAAAAAAG TTTTTACAAT TTAGTCATAA CCGATTTTGA TGAATTTAGA
AAATGGCAAA ATACATTATC ATTTTTAGAA ACTATAGATG AACGAAACTA TACAAAATAT
TTTTCAATTC CGTATAAGAA AAAGGCTCTT TGCTTAAATA GTAAATCAAT AGTAAATATC
AATTATCTTT CATTGCTTAA ATTAATAGGG GGTGATTCAA AAGTGTGTGT AGATGAATCA
GGAGAAATCA AAGAGATATA TTGGGGTGAT ACATTATCAT CAGTTTTATA TGTAGAGTAT
TCTGATTTTG CTAAAAAAAA TATATTGCAA TTCTTAGCTA ATAATAAACT AATGATTGCG
AATCTTTTAT CTTATTGTGA TGAATCTGAT TATACTAATT TTCAACAGTT CAATGGATAT
TTTACAATTG AAATCGACAA GCTTATGAGG CTGTGTAAAA TTCAAAAAGA TGCTAGTAAG
TATTTGTCGG AAAAATTCGA ACTTAGTAAA TTTAAATCTG AGGTGCTAGA AATGGAATTT
GAACTTAATA AATCAGATCT TGCCACAGAT GAGATATTGC CTTTCTAA
 
Protein sequence
MLDDIIKKAT GGLDGLVDDL VKSATGKVKE KISEAFAINK LQYFKDNVAR IGQVKTILHP 
DSIVHLTDIF FDQAVLFNDE YIESFSQFGD KQVLVEGGPG QGKSLYLRKL CLKEGTGNSY
IPIFIEFRNL RYKNKLKEEI MDAIEDLGVK LDNTLFDFLA KSEKILLLLD GFDEVPNNER
KRVARELETI VRTYPKLRVV ISSRPDSGMG SSFYFSKKKI SPMTLVTQQD FVKHLYKADR
QSESINNILS NSSFISEITT TPLLLTLFTI TYNTRQFKPD SLAEFYSLIF PTMLYRHDRM
KIGFERERKA GLTDYQMQRL FDSISFLSLH DNNTRFPVLQ FQGYLERAAK LERLPENIED
LLIDDITSIT ALIIRDGFNY FSFTHKSIQE YFASVFIFRL PESRKKSFYN LVITDFDEFR
KWQNTLSFLE TIDERNYTKY FSIPYKKKAL CLNSKSIVNI NYLSLLKLIG GDSKVCVDES
GEIKEIYWGD TLSSVLYVEY SDFAKKNILQ FLANNKLMIA NLLSYCDESD YTNFQQFNGY
FTIEIDKLMR LCKIQKDASK YLSEKFELSK FKSEVLEMEF ELNKSDLATD EILPF