Gene Ping_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2309 
Symbol 
ID4624104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2808351 
End bp2809163 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content43% 
IMG OID639797450 
Productalpha/beta hydrolase fold 
Protein accessionYP_943649 
Protein GI119945969 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.118678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA TCAATAGGAA CAATGTCAGA GTATGCGGTA AAGGCGCTAA AACAATTGTG 
TTTGCCCATG GCTATGGTTG TGATCAATCT ATGTGGCGTA GAGTCAGTCC GTCCTTTGAA
GATGAATATA GGGTGGTATT ATTTGACTAT GTTGGCGTAG GTTTGTCTAA TGCTGATGCT
TATGATCCAG TGCGTTATTC AAGTTTGGCC GGTTATGCCA AAGATATTGT CGAGATTTTT
ACAGCACTTG ATTTGCAAGA TGCGATCTTG GTAGGGCATT CAGTCAGCAG TATGATTAGC
TTGTTAGCTG CAATCAAAAT TCCCCATAGA ATCTCAAAGT TGATCATGAT TTGCCCAACC
CCATGCTATT TGAACGACCG ACCCGATTAC ATAGGTGGCT TTGAACAGGC CGACATTGAG
GGTTTGCTAG ATATAATCGA TCGCAATCAA CCAGGTTGGG CAGCTCATCT CGCCGGTATT
GTTGTAAATA ACCCCGATCA ACCAGAATTG GCACAAGAAC TGGAAGTCAA TTTTTGTGCC
ATGGATCCCG CCATAGCTAA GCGTTTTGCT AAAGCAACTT TTTTGGCGGA TAACCGTTCT
GATCTGGTTG GTTTTGACAA GCCCTGTTTG ATTCTTCAGT GCCAGGAAGA TTTAGTTGCA
CCGAATGTCG TAGGCGATTA TTTACATCAA CATTTGCTTA ATAGTCACTT GCAGCAGATG
AAAGCGACCG GACACTGCCC CCATATGAGT CATCCGCTGG AAACCATCGA ATTGATCAAA
AAATACCTTG CCAGTAATGT AAAGCAGAAC TAA
 
Protein sequence
MNIINRNNVR VCGKGAKTIV FAHGYGCDQS MWRRVSPSFE DEYRVVLFDY VGVGLSNADA 
YDPVRYSSLA GYAKDIVEIF TALDLQDAIL VGHSVSSMIS LLAAIKIPHR ISKLIMICPT
PCYLNDRPDY IGGFEQADIE GLLDIIDRNQ PGWAAHLAGI VVNNPDQPEL AQELEVNFCA
MDPAIAKRFA KATFLADNRS DLVGFDKPCL ILQCQEDLVA PNVVGDYLHQ HLLNSHLQQM
KATGHCPHMS HPLETIELIK KYLASNVKQN