Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2305 |
Symbol | |
ID | 4624623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2800817 |
End bp | 2801692 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639797446 |
Product | nucleic acid-binding protein |
Protein accession | YP_943645 |
Protein GI | 119945965 |
COG category | [K] Transcription |
COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.529702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGAA AAAAAGCATC GTTACCAATA ACAGTAATTC CTCTTGAGCT AGCAGTGAAT CAACAAGAAG CGGAGATAAA AATTACTGAT AGAATTAACA AAAGTAATGA ATTATTAGAA ATTACAATTC AAAACTCTCA GCAATTACAT GATGCAGGCA AAGAGTATGC AAAGTGGGAT GATTTTAATA AACAATTACT AAAACGGCTT TTTACATCAG AAGAATTGTT TCTAGAGTAT AATCGATACA AAGGTGGAAT GAGTATTCTT AGGGGAGAAA AATCACTAGG TGAAAAAAGA AATGATTTTA CTGTAAAGGT AGAAGATAAA TGCCACCGTC TTGAGTCAAT AATTGAAAGA TTGGAATTAA TTCCAGAATC TAGAGAACTC ATTTCAGTCA ATTCCATTCA AAATGACAAA TCTAAAAATG TTAATTATTC ACAAATATTT ATAGTCCATG GTCATGATGA TTCTGCAAAA TTAGAAGTTG CTCGATTCAT TGAGAAATTA GGATTCGAGC CAATAATTAT TCATGAGCAA CCTAATGCTA GTAAAACAAT TATTGAAAAA ATTGAAGCGT TTTCCAATGT TGGTTTTGGT GTCGTCATAT ATAGCCCATG CGATATTGGT GGTAAAAACA AGGATAATCC TGAACTTGCA GGTCGCGCAA GGCAAAATGT GGTTTTTGAG CATGGTTTCC TTATTGGTAA GCTCGGTCGT TCTAAAGTTT GTCCTCTTGT TACTGGAAAT GTTGAAACCC CTAACGACAT TTCGGGTATT GTTTATACAT CAATGGATAC AAGTAATTGG CAAATTGCTT TGGCAAAAGA ATTAAGAACT GCAGATTATG CTGTTGATAT GAATGATGTG ATTTAA
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Protein sequence | MARKKASLPI TVIPLELAVN QQEAEIKITD RINKSNELLE ITIQNSQQLH DAGKEYAKWD DFNKQLLKRL FTSEELFLEY NRYKGGMSIL RGEKSLGEKR NDFTVKVEDK CHRLESIIER LELIPESREL ISVNSIQNDK SKNVNYSQIF IVHGHDDSAK LEVARFIEKL GFEPIIIHEQ PNASKTIIEK IEAFSNVGFG VVIYSPCDIG GKNKDNPELA GRARQNVVFE HGFLIGKLGR SKVCPLVTGN VETPNDISGI VYTSMDTSNW QIALAKELRT ADYAVDMNDV I
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