Gene Ping_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2106 
Symbol 
ID4626685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2563046 
End bp2563855 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content43% 
IMG OID639797249 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_943451 
Protein GI119945771 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CAATTTTAAT TACTGGTGCA ACCGACGGTA TAGGTTTGGC AACAGCAAAG 
ATGTTAGCTT CAAATGGTCA TAGTCTATTG GTACATGGAC GTAACCCTGA AAAGTTAAAT
AAAGTGGTAA AAATGCTGAC TGAACTGCCT AATGCCGGAA CAGTTAAAAG TTATCTGGCA
GACTTGTCAC AAATGTCCGA TGTAAAGACC TTAGCGAATA AGATAAAAGC ACAATACGAT
AACCTTGATG TGCTGATTAA CAACGCCGGT GTTTTTAAAG TAGATAACCC CATAACCAGG
GACGGACTTG ATCTGCGCTT TACTGTTAAT ACCATTGCGC CTTATCTTTT ATTGCAGGAG
CTGCTGCCAT TGCTTGCCAC TTCCGCGCGA GTAATTAACC TTTCTTCAGC AGCCCAGGCA
CCCGTGAATA TGCAAGCATT GCTGGGTAAA GTGCCGCTTT CCGATATGGA AGCTTATGCG
CAAAGCAAAC TTGCCATTAC CATGTGGAGC CGAATAATGG CTCAAACACT TAAAGATAAG
GGGCCCGTTA TTATTACAGT AAACCCGGGC TCAATGCTCG GCAGTAAAAT GGTACAAGAA
GGGTTTGGTG TGGCAGGTGG TGACTTAAAA ATAGGCGCTA AAATCTTAAC GCGGCTGGCA
CTGGATAAGG AATTCGCCGG TTCTTCTGGT CAGTATTTCG ATAATGACGC CGGCCGATTT
TGTTCTCCAC ACCCTGACGG ATTGAATTTA CAAAAATCAG CTGAGTTGGT TACGACCATA
GAAAGTATTT TATCCGGCAT TAAACATTAA
 
Protein sequence
MKKTILITGA TDGIGLATAK MLASNGHSLL VHGRNPEKLN KVVKMLTELP NAGTVKSYLA 
DLSQMSDVKT LANKIKAQYD NLDVLINNAG VFKVDNPITR DGLDLRFTVN TIAPYLLLQE
LLPLLATSAR VINLSSAAQA PVNMQALLGK VPLSDMEAYA QSKLAITMWS RIMAQTLKDK
GPVIITVNPG SMLGSKMVQE GFGVAGGDLK IGAKILTRLA LDKEFAGSSG QYFDNDAGRF
CSPHPDGLNL QKSAELVTTI ESILSGIKH