Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2103 |
Symbol | |
ID | 4626682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2557793 |
End bp | 2559022 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639797247 |
Product | cyclic-di-GMP regulatory protein |
Protein accession | YP_943449 |
Protein GI | 119945769 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.444099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTAT ACGAACATCT GGAAGAGATC ATTGTGAGCG AGCAGTTAAC TTCCTTATTC CAGCCAATAT ATGCCACAAA TAGCAGTGAA GTTTATGGTT ACGAAGCTTT AATCAGAGGG CCTTACGACA GTCCTCTACA TAATCCGGAA GCGCTATTTG ATGCTGCAAT TGAATATAAT TTACTGTCGG AATTAGAGCT TATTTGCCGC AAAAAATCCA TTGCCCGTTT TGTTGAATTA GGGTTAAAAG GGTTGTTATT TATTAATGTT AACCCGATGG TATTTTTACA ATCTGATCAT CCGCAGGGTA AAACACTTTC TTATTTAACA GAGCATAAAT TAAAGCCAGA GCAGGTTGTT ATAGAGCTGA GTGAAAAATA TCCGATTGAT GACCCTGACA TTTTACAAAA AGCCTTAATA TATTATCGTG ATCTTGGTTT TAAAATTGCG GTTGATGATT TGGGCTCAGG TTATGCGGGC TTGAAACTGT GGTCTGAGGT GAAACCTGAT TTTGTTAAAA TAGATCGTTA TTTTATTGAC CAGTGTGATA AAGATCCTAT AAAAAGTGAG TTTATCAAAA GTATTTTCAA TTTAGGGCAA AGAATTAATG CCAAAGTCAT TGCAGAAGGG ATTGAAACAG AAGAAGAATT TTGGCTATTA GATGAACTAG GTATTAGTAT TTATCAGGGT TTTTTATTTG CCAGGCCAAT GTTGTCTCCA TCGGCTACTG TCTCCGCTGT GATCCAAAAT CGTGATCGTT TGGCGAATCT TGCGCTTAAT AATGAATCTT TGCTTAGCCC GTTATTACAA ATAATAATCC CAGTCAATTT TGATCAAACA ACAAAAACAG TGCTGGATTA TCTTCACCAA CACCCCGAGC TGGATTCTAT TCCTGTGGTT AAAGAAGATA AGCCTGTGGG TATGATTTTA CGTGAACATA TTTTAGCTTT ATTTTCTACG CCTTACGGTA AAACCCTGCA TGAAAATAAA CCTATCCATG AAAACATGAT CGATTCTCCC GTTATTGTTG AAGCAAAGAC GCCACTTGAT GAAGTGGCTC AATGGGTCAC GTGCGGAGAT GATGAAAAAT TATTATGGCA TTTTATCATT GCAGATAAGG GACGTTATCT TGGAATCGGC TCAGTGCGTG ATCTGTTACG CCAGTTAATT CAACCGAACA CTCGCTCGGC CAACTCAGTA ACGCGCTTGC CAACTATTTT CGCTGCTTAA
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Protein sequence | MALYEHLEEI IVSEQLTSLF QPIYATNSSE VYGYEALIRG PYDSPLHNPE ALFDAAIEYN LLSELELICR KKSIARFVEL GLKGLLFINV NPMVFLQSDH PQGKTLSYLT EHKLKPEQVV IELSEKYPID DPDILQKALI YYRDLGFKIA VDDLGSGYAG LKLWSEVKPD FVKIDRYFID QCDKDPIKSE FIKSIFNLGQ RINAKVIAEG IETEEEFWLL DELGISIYQG FLFARPMLSP SATVSAVIQN RDRLANLALN NESLLSPLLQ IIIPVNFDQT TKTVLDYLHQ HPELDSIPVV KEDKPVGMIL REHILALFST PYGKTLHENK PIHENMIDSP VIVEAKTPLD EVAQWVTCGD DEKLLWHFII ADKGRYLGIG SVRDLLRQLI QPNTRSANSV TRLPTIFAA
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