Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2041 |
Symbol | |
ID | 4624601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2487157 |
End bp | 2488404 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639797195 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_943397 |
Protein GI | 119945717 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0334353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0804458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAGATA GAACAATCAT TAAAAATATT TCTTCCCTTT TTAGTATCCG TGTTGCGGCG TATATTGTCC CATTAATCAC GCTACCTTAT CTAGTTCGAG TACTAGAGCC AATAGGATAT GGGACACTAG GCTTTAGTTT AGCGATTATT CAGTATTTTG TTATTGCAGT TAACTTTGGA TTTGACTTGT CAGCGACACA AAAAATAGCA CAAAGTCCAG ATAATAAATT TAAAATAAGC ACCATTTTTT GGAATGTTAT AGCAGCAAGA TTTCTTATGT CAGTTACAGG TTTATTTATA CTATTTATAC TTTCAAATAT CGCTACTAGT ATAGAGATAA TATTACCTAT ACTGTTGTGT GCGTATTTGT CTGTGTTTGG GGCTGCTTTA TTTCCACAGT GGTTGTTTCA AGGAAAAGAA CAGTTAGGTA CTATTTCAAT AATCAGGATT GTACTCCAAG TAATAAGTGT TCCATTTTTA TTTATCTTTG TAAAGCAAAC AGATGATATT TGGGTTGCTG CATTAATCAG CTCAGTTCCA TCGTTAATTA TCGTAGTTTT TTCTTCATAT TTGATTTTCA AAAGAAAATG GATTGTTTGG CAAACGCCTT CAATTAATCG CATTAGAGGA GAGTTGGCAG ATGGTTGGCA TTTGTTTTTG TCTACGGCAG CGATGAGTCT CTATACAACG AGCACAACAG TAATTTTAGG CATTATTGCA GGGCCTATAA GTGTAGCAGT TTATGTTTCT GCAAATAAAT TGCTACAGGC AGCACAGGGC ATATATTCAC CAATATCTGT GTCTTTCTAT CCTCGAATTA ATAGTTTAAT TAGTAAAAGT AAAGATGAAG CGTTAGCTAT GATAAGATAC TTAATGAAAA TCCAAATCAT ATTAACTTGC TGCATTAGTG TTAGCTTATT TTTTTTTGCT CCTTTAGTCG TCGAATTGTT ATTTGGTCAG GAATTCGAAA GAAGTGCTGT AGTACTAAGA ATTATGAGTG TGTTACCTAT TATAATAGGT CTTAGTAATA TTTTTGGTAT TCAAGTTCTT CTAACGCATG GGTATAAAAA AGAATTCTCA AAAATATTAA TCTCTTCCGG TTTTTTTAGT TTGGTTACAT TGGTACCTTT ATGTTATTTA TTGGATTCAG AGGGGGCTGC AATATCTGTT ATCATCACTG AATCAATAGT CATGTTATTG ATGTTACGCA CTATAAATAA AAAAGAAATC CCCCTCTTTA AACCTTAA
|
Protein sequence | MLDRTIIKNI SSLFSIRVAA YIVPLITLPY LVRVLEPIGY GTLGFSLAII QYFVIAVNFG FDLSATQKIA QSPDNKFKIS TIFWNVIAAR FLMSVTGLFI LFILSNIATS IEIILPILLC AYLSVFGAAL FPQWLFQGKE QLGTISIIRI VLQVISVPFL FIFVKQTDDI WVAALISSVP SLIIVVFSSY LIFKRKWIVW QTPSINRIRG ELADGWHLFL STAAMSLYTT STTVILGIIA GPISVAVYVS ANKLLQAAQG IYSPISVSFY PRINSLISKS KDEALAMIRY LMKIQIILTC CISVSLFFFA PLVVELLFGQ EFERSAVVLR IMSVLPIIIG LSNIFGIQVL LTHGYKKEFS KILISSGFFS LVTLVPLCYL LDSEGAAISV IITESIVMLL MLRTINKKEI PLFKP
|
| |