Gene Ping_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2041 
Symbol 
ID4624601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2487157 
End bp2488404 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content33% 
IMG OID639797195 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_943397 
Protein GI119945717 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0334353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0804458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATA GAACAATCAT TAAAAATATT TCTTCCCTTT TTAGTATCCG TGTTGCGGCG 
TATATTGTCC CATTAATCAC GCTACCTTAT CTAGTTCGAG TACTAGAGCC AATAGGATAT
GGGACACTAG GCTTTAGTTT AGCGATTATT CAGTATTTTG TTATTGCAGT TAACTTTGGA
TTTGACTTGT CAGCGACACA AAAAATAGCA CAAAGTCCAG ATAATAAATT TAAAATAAGC
ACCATTTTTT GGAATGTTAT AGCAGCAAGA TTTCTTATGT CAGTTACAGG TTTATTTATA
CTATTTATAC TTTCAAATAT CGCTACTAGT ATAGAGATAA TATTACCTAT ACTGTTGTGT
GCGTATTTGT CTGTGTTTGG GGCTGCTTTA TTTCCACAGT GGTTGTTTCA AGGAAAAGAA
CAGTTAGGTA CTATTTCAAT AATCAGGATT GTACTCCAAG TAATAAGTGT TCCATTTTTA
TTTATCTTTG TAAAGCAAAC AGATGATATT TGGGTTGCTG CATTAATCAG CTCAGTTCCA
TCGTTAATTA TCGTAGTTTT TTCTTCATAT TTGATTTTCA AAAGAAAATG GATTGTTTGG
CAAACGCCTT CAATTAATCG CATTAGAGGA GAGTTGGCAG ATGGTTGGCA TTTGTTTTTG
TCTACGGCAG CGATGAGTCT CTATACAACG AGCACAACAG TAATTTTAGG CATTATTGCA
GGGCCTATAA GTGTAGCAGT TTATGTTTCT GCAAATAAAT TGCTACAGGC AGCACAGGGC
ATATATTCAC CAATATCTGT GTCTTTCTAT CCTCGAATTA ATAGTTTAAT TAGTAAAAGT
AAAGATGAAG CGTTAGCTAT GATAAGATAC TTAATGAAAA TCCAAATCAT ATTAACTTGC
TGCATTAGTG TTAGCTTATT TTTTTTTGCT CCTTTAGTCG TCGAATTGTT ATTTGGTCAG
GAATTCGAAA GAAGTGCTGT AGTACTAAGA ATTATGAGTG TGTTACCTAT TATAATAGGT
CTTAGTAATA TTTTTGGTAT TCAAGTTCTT CTAACGCATG GGTATAAAAA AGAATTCTCA
AAAATATTAA TCTCTTCCGG TTTTTTTAGT TTGGTTACAT TGGTACCTTT ATGTTATTTA
TTGGATTCAG AGGGGGCTGC AATATCTGTT ATCATCACTG AATCAATAGT CATGTTATTG
ATGTTACGCA CTATAAATAA AAAAGAAATC CCCCTCTTTA AACCTTAA
 
Protein sequence
MLDRTIIKNI SSLFSIRVAA YIVPLITLPY LVRVLEPIGY GTLGFSLAII QYFVIAVNFG 
FDLSATQKIA QSPDNKFKIS TIFWNVIAAR FLMSVTGLFI LFILSNIATS IEIILPILLC
AYLSVFGAAL FPQWLFQGKE QLGTISIIRI VLQVISVPFL FIFVKQTDDI WVAALISSVP
SLIIVVFSSY LIFKRKWIVW QTPSINRIRG ELADGWHLFL STAAMSLYTT STTVILGIIA
GPISVAVYVS ANKLLQAAQG IYSPISVSFY PRINSLISKS KDEALAMIRY LMKIQIILTC
CISVSLFFFA PLVVELLFGQ EFERSAVVLR IMSVLPIIIG LSNIFGIQVL LTHGYKKEFS
KILISSGFFS LVTLVPLCYL LDSEGAAISV IITESIVMLL MLRTINKKEI PLFKP