| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1952 |
|---|
| Symbol | |
|---|
| ID | 4626993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2374175 |
|---|
| End bp | 2375071 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639797118 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_943320 |
|---|
| Protein GI | 119945640 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.110398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0228516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAC ACCATCACCA TCACCCAGTA AGCGGTAAAA ATCTTTTTAT CACTATTGTG
TTAAATATCA TTATCACTCT CTCGCAAATA GTTGGCGGAA TACTCTCAGG TTCGCTTGCA
CTGTTAAGTG ATGCGATGCA TAACCTGAGT GATGTGGTCG CTTTATTAAT TGCCTATTGG
GCAAATAAAA TTTCATCAAA ACCAAAAAAC AATCAAAAGA CGTTTGGCTA TAAAAGGGCT
GAGATCATAG CGGCACTTTT TAACGCATCG GCACTTTTTG GTATCGCACT TTTTCTTATC
ATAGAAGCTA TCCATAAATT CTTAAATCCA GAGACCATAG ATTCTATACT CGTTATTGCG
TTAGGATTTT TAAGTATCGT TTTAAATGCC ATCAGCGTAC TTCTCATAAA AGATGATGCC
AAGCACAACA TGAATATGAA AGCTGCTTAT GTTCACCTAC TTACCGATGT GATGACATCG
GTTGCAGTGG TTGTTGGCGG GCTATTGATG TACTATTTTA ACTTGTTTTG GATAGATTCA
ATTATCACGG TTTTAATTGC AGGTTATCTT ATAAAAGCAT CTTATGCTTT GATTGTAGAG
TCCATCTCAA TATTAATGCA AAGTGTTCCA GACGACATCA ATATAGATGA GCTAAAAATA
GACATAGAAA AGTATGAACC CATTGATAAT ATTCACCATC TTCATATTTG GAAATTAGAC
GATCACGATA TACATTTAGA GGCGCATATT GATTTCAATG AAAATTTAGC ATTAAAAGAG
GTAACAAAAA TTTGCGATGA AATTTCTGAT GCTATCAAAA AGAAATATCA TATCACCCAT
ATGACGATAC AACCTGAATA TGAAAAAAAT GATAATAAAG AATTGATTTA TTCTTAG
|
|---|
| Protein sequence | MSEHHHHHPV SGKNLFITIV LNIIITLSQI VGGILSGSLA LLSDAMHNLS DVVALLIAYW
ANKISSKPKN NQKTFGYKRA EIIAALFNAS ALFGIALFLI IEAIHKFLNP ETIDSILVIA
LGFLSIVLNA ISVLLIKDDA KHNMNMKAAY VHLLTDVMTS VAVVVGGLLM YYFNLFWIDS
IITVLIAGYL IKASYALIVE SISILMQSVP DDINIDELKI DIEKYEPIDN IHHLHIWKLD
DHDIHLEAHI DFNENLALKE VTKICDEISD AIKKKYHITH MTIQPEYEKN DNKELIYS
|
|---|
| |