Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1948 |
Symbol | |
ID | 4626989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2369774 |
End bp | 2370421 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797114 |
Product | hypothetical protein |
Protein accession | YP_943316 |
Protein GI | 119945636 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00544645 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0118846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACC GTTACCGCGC CCAGTTTATA AACAGCTTGT CCGGTTTTAA GAGCGTTAAC CTTATTGGCA CGCAGGATTC CAACGGACAA ACTAATCTTG CGATATTTAG CTCAGTTGTA CACTTAGGCG CGTCACCTGC ATTGGTTGCT TTTGTTATGC GGCCGGATAA CGGATCAAGA CATACTCTTG ATAACATTAT CAGCACAGAG CATTACACTA TAAATCAAGT ATCAGCTCAA TTTTATCAGG CAGCTCACCA AAGCTCTGCT TGCTATCCAA AAGAGGAAAG CGAATTTACC CGCTTAGACT TATCAGAAAG TTATATTAGC GATATTAATG CCCCCTTTGT TAAAGAAAGT CGCTTGAAGT ATGCGGTTAA GTTAAAAGAA ATCCTGCCAG TCTCGAGTAA TAACACCCAG TTTATTATTG GGGAAATCAC CCATGTCATT TGCGATGAGA GTGCTCTAAA AGACGATGGT TATATCGATA TAGAAGCCTT AGAAACTGTG ACTGTCTCCG GGTTAGACAG TTATCATATA AGCGTACGAC TGGCTCGTTT AAGTTATGCA AAACCTGACA AGTCCTCAAC TGAGATTTCA TTAAATGGCT CAGAAAATGT TAGTGCTGAC GCCAGGGGTA AAAGCTAA
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Protein sequence | MDNRYRAQFI NSLSGFKSVN LIGTQDSNGQ TNLAIFSSVV HLGASPALVA FVMRPDNGSR HTLDNIISTE HYTINQVSAQ FYQAAHQSSA CYPKEESEFT RLDLSESYIS DINAPFVKES RLKYAVKLKE ILPVSSNNTQ FIIGEITHVI CDESALKDDG YIDIEALETV TVSGLDSYHI SVRLARLSYA KPDKSSTEIS LNGSENVSAD ARGKS
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