Gene Ping_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1521 
Symbol 
ID4626542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1867444 
End bp1868922 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content37% 
IMG OID639796721 
Producthypothetical protein 
Protein accessionYP_942931 
Protein GI119945251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.812008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0835787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAC GAGTTAATTT AATCTATAAC CGCCTAATTT TAATTTTTTT ATTAGTTATT 
AGTCCTGCTG TACTATCTGC AAGTTTACAG ATTACATGGA GCGATAACTC ATCAAATGAA
GATGGTTTTT TAGTCGAAAA ACGGCTTTTA AACGAGGATA AAATTCAAAA TATTGCGATA
TTACCTGTTA ATAGCCAAGA ATATAATGAT CTAGATCTTG TTAGTAATGA GACATATTGC
TATCGCATTA CAGCATTTAA TAAAGCGGGA ATGGGAAAGT CTGACGAATT CTGTTATCAA
GTACCGACTG ATTTTATTAC AGATGAAGAC ACTGCTGCTA ATCAGGTCAC TGCTGTCGAT
CAGGTCATTG CTGCTGATCA GGACACGGCT GCTGAGCAGG GTATCAGTTC AGTCAAGTTT
ACTGGAAAGG TTGTCCTATC GCATGAGATT ATTGCACAAG TGGTGGATCT TGAGATTGGT
GAAAAGACAC TTTATTCCTT TAAAAGTGAT CTTGCATATA ATCAGGAATA TACCAAAGAT
ACGCTTAATA ACAGTAGCTT TACGGCTAAT GTTGGTGAAA TAAGATATTC AAATGAAGAT
TATTTTAGCT TTCAAAATCA GGGTGTTGAA ATTGATAATG GCTACGCGAG TATGGCATTT
AACAGCAATA ATAGCCTCTC ATTTGTTTTA CAGGGTACGG GCAATAAACA AACTGCGCGT
TTGTATATGC AAGCAGGTGT ATGGTCTGAC GAGCAATCTA ATATTATTGT AACAGCGGGT
GATCAGGTTG AGGTTATTAC GCTACCTAAT GGTTATGCTT GGCATTCCTT TGCCATTGAT
ATTGTTTTTG ATGGCACTGT ACCTGTCCAT ATAGCAACAG AGTCCGATCG TTCAGGTTAC
AGCACTGTTA TGTTTGCTGG CATTGTTTTT GATAAAGAAA ATTTAGAAAA AAATACTTCT
GTTGCCTCCC CTGTTTTTAA CTATGCAGCT TTTGTTGATA TAGATACAAA TTTTGGTGCA
GTAATTGATA CCACAGACGT CACTTTTTAC ACTGCAAAAG CGATTAAGGA TAATGGACAA
CTCTCTAATG CTTCTCTGCA AAACTTATCC TTTTATGGTG AACAAATATA TCGTGATGAT
ATTTATTCTG TCATTAATGA TGGAGCTGAA ATAAATTCAG GTTATCAAAG CATGTCATGG
AATGAGGCTA ACGGTGCTGA AATTAAACTT GAAAGTGCTG ATCAACAGAT AAATACGGCT
TCTGTCTATT TTATTGCGGC AGTTTGGAGC TATGATGCAG CATTTGTTGA GCTGGTTATC
AACGGTGAAA GTGAATTAAT TGAGGTACCT TCAGGTTATG GATGGCATTC CATGAAAGTT
GACATTGAAT TTGAAGGTAT CGTCGATATA AATATCCATC CAGTGGGTGA ATTCGGAGGC
TATAGTGGCT TCGGTGTTGC AGGGATAACC GTACAATAG
 
Protein sequence
MNQRVNLIYN RLILIFLLVI SPAVLSASLQ ITWSDNSSNE DGFLVEKRLL NEDKIQNIAI 
LPVNSQEYND LDLVSNETYC YRITAFNKAG MGKSDEFCYQ VPTDFITDED TAANQVTAVD
QVIAADQDTA AEQGISSVKF TGKVVLSHEI IAQVVDLEIG EKTLYSFKSD LAYNQEYTKD
TLNNSSFTAN VGEIRYSNED YFSFQNQGVE IDNGYASMAF NSNNSLSFVL QGTGNKQTAR
LYMQAGVWSD EQSNIIVTAG DQVEVITLPN GYAWHSFAID IVFDGTVPVH IATESDRSGY
STVMFAGIVF DKENLEKNTS VASPVFNYAA FVDIDTNFGA VIDTTDVTFY TAKAIKDNGQ
LSNASLQNLS FYGEQIYRDD IYSVINDGAE INSGYQSMSW NEANGAEIKL ESADQQINTA
SVYFIAAVWS YDAAFVELVI NGESELIEVP SGYGWHSMKV DIEFEGIVDI NIHPVGEFGG
YSGFGVAGIT VQ