Gene Ping_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1368 
Symbol 
ID4624061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1684901 
End bp1686214 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content39% 
IMG OID639796578 
Productcopper/silver resistance outer membrane protein 
Protein accessionYP_942788 
Protein GI119945108 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA TCACCTCATA TGTTTTATTA AAAAACCATT TTGCTGTTAA TAGACTATTT 
AACAGCCTGT TTAGTTTAAC GTTTTTGTTT AGTTTTAATC TTTTTGCACA GGGCATTAGT
CTTCATGATG CCTCGCTGAT GGCGATTAAA TCCGACCCCG CACAGCAAAT TTATCAATCC
CAACAAGCTG CATTGATTGC ACAGGGCATT GCCGGATCGA CGCTGGCCGA CCCTATGATT
AAGCTTGGCA TGGCTAACGT GCCGACGGAT AGTTTTCAAT TAGATAAAGA TCCTATGACC
CAAATCACGG TTGGCTTATC ACAACAATTT AGCCGTGGTT CGCAACGTGA ATTGACTCAG
GAAGGCTTTA ATCAACGCGC TGATATGACG GTTTCTTTAG GGTTAGATCG CAAGTTAACT
GTTAAAAAAA GCGTGCGTGA GCTGTGGCTT AAAATTCTGT TTATTGATAA ATCATTACGA
ATAGTAAAAG AAAATAAAAA ACTCTTTTCA GGTTTTTACC AAGATTTGCA GGCGAAATTT
TCTTTAGGAC TTACTGAGCA CGAAGATTTA ATTTTAGCAG AAATTGAGAT CAGTAAATTT
GATGAAAAAA TTGCTGCGTT AAATCAACAA TCACTTAATT ATCGCAGTTT GTTAAGTGAG
CATATCGGCG AATATGCCTA TCAGACACTG CCGAGTGCAA TACCGCAATG GCCAGAAACC
CTGTCCTATG TAAAGGCCGT TAATGCCAAT AATACCGAGC ATTATGAATT GCTTAGCAAT
CACCCCAAAG CCCAAATGTT AGTGCAGAGT ATAACACTGG CGGATAACGG TATCGAACTT
GCTGAGCAGA ATTACAAACC CGCTTTTAAA CTGGAAGTGG GTTACGGACA TCGCTTAAGT
GAGACTGATA TGGGCAAACC AAGATCGGAT CTATTGAGCG CTTTTGTGTC TATGGATATT
CCGTTATTTA CCGATAAACG CCAAGATCAA AAACTTATCT CTGCGCAATA TAACAAAGGG
CAAAAGCAAG CTGAACATCG TTTGTTATTG CGCCAGCTTA ATGCCTTATT AAATGCTGAA
ATCAGTAATT ATCAGCAACT TCAAGCGCGT CAAATTCGTT ACCAGGATAG TCTTCTGAAA
CAGGCTAAAC TGCATACCAG ACTGTTAGAG CAAAGTTATC AATCTAATAC GCGCCCTTTC
AAAGATGTTA TTGATGCCTA TATCCACGAG CAGAACCTGA CCTTAGAATA TCAACAACTG
TATTTCGATG GCCTTAAAAG CCTGTCTAAC ATCCGTTATT TCCAGGCACT TTAA
 
Protein sequence
MMKITSYVLL KNHFAVNRLF NSLFSLTFLF SFNLFAQGIS LHDASLMAIK SDPAQQIYQS 
QQAALIAQGI AGSTLADPMI KLGMANVPTD SFQLDKDPMT QITVGLSQQF SRGSQRELTQ
EGFNQRADMT VSLGLDRKLT VKKSVRELWL KILFIDKSLR IVKENKKLFS GFYQDLQAKF
SLGLTEHEDL ILAEIEISKF DEKIAALNQQ SLNYRSLLSE HIGEYAYQTL PSAIPQWPET
LSYVKAVNAN NTEHYELLSN HPKAQMLVQS ITLADNGIEL AEQNYKPAFK LEVGYGHRLS
ETDMGKPRSD LLSAFVSMDI PLFTDKRQDQ KLISAQYNKG QKQAEHRLLL RQLNALLNAE
ISNYQQLQAR QIRYQDSLLK QAKLHTRLLE QSYQSNTRPF KDVIDAYIHE QNLTLEYQQL
YFDGLKSLSN IRYFQAL