Gene Ping_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1095 
Symbol 
ID4625808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1365007 
End bp1366035 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content39% 
IMG OID639796311 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_942533 
Protein GI119944853 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.296498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGG AAAACAGCAA AAAATCCGTC GTTACTCCCT GGTTAACGCC GGTATTTAAG 
CAATTAATAA ACACTTTTCA GGCGGGTCGA TTTGCGCATG CTTTATTATT TACAGGTTGT
GCGGGAATTG GTAAGTTTGA ACTTGGAAAG CACCTTGCCA AGTACCTTTT ATGCTCCAAT
AAACAAGCTG CGTCCTGTGG ACATTGCCAT TCCTGTCAGC TTTTTGAGGC GCAAAATCAT
TTAGACTTTC ATCTATTACA AAATGAAACT AATAAATCGA TTGGTATTGA ACAGGTAAGA
AACTTAATTG CTAAGCTTAA TGAGCGTCCC CATTTAGGGG ATAATAAAGT GGTTATTATT
AAAAATGCCA ACTTATTAAC CACGGCAGCA GCCAATGCAT TACTTAAAAC TCTGGAAGAG
CCACAGGGTA ATAGTTACTT GATTCTGCTT ACGCGCAGCC ATCACCAACT TATGCCGACC
TTATTAAGCC GTGTTCAGCA TACTCATTTA CATACGCCGG AAGATACCGA GTTGTTCGCT
TGGCTTGCTT TGCAGGGATT TAATATTCAA GATATAGGTT TATTGCGCCT CTATCAAAAT
AGTCCTTTTG CTTTATTAAG TCACTTGCAG AGCGTGCGGG CAGAAACAGG GGATGATGAA
CGCCGAGAGT GTGTCGAGGG GTTGTTTTAT TTGCTCAGTC ACCCGGAAAC TTTATTTACC
TTTAGTGTGT TTCTGGCGGA ACAGGCGGAA CAACGTTTGT TATTACTTTT CTATCTTTTA
CATGATTTAC ACAAGCTAAA ATTAGCCGAG TGTATTGCCG GCAACGAAAT TCAATTAGAA
AGCGATGCCG TGTATGGATT TGCTTATCCA CAATTACAGA TTTGGAAAAA TCGAATAAGC
TTAAAAAGTT TACGTTTTTT ATGCGACGAA TTATTGCAAA CGCGTAATCT GTTAGTTGAG
CATTCGGCAT TAAAAAAAGA ACTTTTGATT AATGCCCTGT TAATCAAAAT AAAAAATGAA
TTTAAATGA
 
Protein sequence
MTLENSKKSV VTPWLTPVFK QLINTFQAGR FAHALLFTGC AGIGKFELGK HLAKYLLCSN 
KQAASCGHCH SCQLFEAQNH LDFHLLQNET NKSIGIEQVR NLIAKLNERP HLGDNKVVII
KNANLLTTAA ANALLKTLEE PQGNSYLILL TRSHHQLMPT LLSRVQHTHL HTPEDTELFA
WLALQGFNIQ DIGLLRLYQN SPFALLSHLQ SVRAETGDDE RRECVEGLFY LLSHPETLFT
FSVFLAEQAE QRLLLLFYLL HDLHKLKLAE CIAGNEIQLE SDAVYGFAYP QLQIWKNRIS
LKSLRFLCDE LLQTRNLLVE HSALKKELLI NALLIKIKNE FK