Gene Ping_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0960 
Symbol 
ID4626672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1205472 
End bp1206599 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content41% 
IMG OID639796178 
Productcupin 4 family protein 
Protein accessionYP_942400 
Protein GI119944720 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.786571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.101373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC TTAATTTAGA TATTAACGAT TTTCTTGACA CCTACTGGCA GAAAAAACCA 
ACCGTTATCA AACAAGGTTT TGTTGATTTT GAAGATCCGA TTATGCCCGA TGAAATGGCC
GGATTAGCAA TGGAAGAAGA GCTTGAGAGC CGCCTTATTT ATCAAGAGGA TGGTGAATGG
CAAGCACTGA GCGGTCCTTT TACAAGCTTT GAAAGATTGG AAAATGATGG TGCAACATTA
TTAGTACAAG CAGTGGATCA CTGGCATCCC GATGCACAGG AGTTAATACG ACCTTTCCGC
TTTTTACCTA ACTGGCGGAT TGATGATCTA ATGATCAGCT ACTCCACGCC AAAAGGTGGA
GTAGGCCCAC ATATTGATAA TTATGATGTA TTTATTATTC AAGGCCTTGG AAAACGCCAT
TGGCGGGTTG GTGATAAAGG AGCATTACCA GAATTTGCTG CCCATGATGC ACTTAAACAT
TGTGAGTCCT TTGATGCCAT TATTGATGTC GAACTTGAAC CGGGTGATAT TCTGTACATT
CCCGCCGGTT ATCCACATGA AGGTTATTCG ATTGAAACAT CACTTAATTA CAGCATCGGA
TTTCGTGCCC CTGATCAAAA TGATCTATTA AGCAGTTTTA CCGATTACTG TATCGATACG
AATCCAGCAC CAGAACGTTA TGCAGACAAG GAAATGTTAT TACGTGAAAA GCCGGGGCAA
ATTGAAACTC CCGAGCTTAA CGAATTACAC CGTATCATGT TAGCCAATTG TGCAACGCCA
GAAATGCTTA TGCCTTGGTT TGGCCGTATG ATTAGCGAAG CTAAACATGA TCTTGATATA
GCCGAACCCG AGCAACCTCA TACGGCACAA TCTATATTAG AGCAGCTGGA AGAGGGAGCA
CAATTTGTAA GGTTAGGTGG ATTACACGCG GTCTACTTTG AACAAGCCCC GGAATTACTG
TTTATTAATG GAGAGCAATT TAATTGTGAA GGTTTTACCG AGTTAGGGCA TCATCTTTGC
GATCAAGATG AGGTCGGTGG TGAATTATAT GATCTGTTAA TTGAAAATAA AAATGCGCTA
ATACTATTTA CTGATTTAGT GAATCAGGGT TACTGGTATG CAGCTTAA
 
Protein sequence
MFELNLDIND FLDTYWQKKP TVIKQGFVDF EDPIMPDEMA GLAMEEELES RLIYQEDGEW 
QALSGPFTSF ERLENDGATL LVQAVDHWHP DAQELIRPFR FLPNWRIDDL MISYSTPKGG
VGPHIDNYDV FIIQGLGKRH WRVGDKGALP EFAAHDALKH CESFDAIIDV ELEPGDILYI
PAGYPHEGYS IETSLNYSIG FRAPDQNDLL SSFTDYCIDT NPAPERYADK EMLLREKPGQ
IETPELNELH RIMLANCATP EMLMPWFGRM ISEAKHDLDI AEPEQPHTAQ SILEQLEEGA
QFVRLGGLHA VYFEQAPELL FINGEQFNCE GFTELGHHLC DQDEVGGELY DLLIENKNAL
ILFTDLVNQG YWYAA