| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0888 |
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| Symbol | |
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| ID | 4625227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1113574 |
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| End bp | 1114134 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639796092 |
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| Product | rhomboid family protein |
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| Protein accession | YP_942329 |
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| Protein GI | 119944649 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.592771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.86404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTCTC TTATTATCGA AACGTCATTG ATAATATTAC TGACTCTTAT ACTTTATTTG
TTTGAGCCGG AAGCCAGTGA ACTACTGGCA TATTACCATA ATGGCATAGC AGAAGGAGAA
ATTTGGAGAC TGATTAGTGC CACATTTTGC CATACTAATT TTAATCATCT GGTATTAAAT
ATCGTGGGCT TAGTGATCAC TTTGGCATTA TTTGTTGATC TTTTTAAGAC CATTAAAATT
TTCCCAATCA TTATTTTCTG CAGTTTATTT ATCGGGTTAT GCCTGTTTTT CTTTGATACT
GAGGTTATTT GGTATGTGGG CTTATCGGGT GTTTTACACG GTTTATTTAG CTACGGGGTT
GTCACCGATA TTGCGAAGAA AGATCCCTGG GGTTATCTGC TGGGAGCAGG TCTGGTTATT
AAGATTATTT ATGAGCAAAT GTTTGGCGCA TCGCAAAGTA CGATCAATTT AATTGCGGCA
GAAGTATTAG TTAATGCGCA TCTTTACGGC GCTATCGCGG GTTTTATTTT TTTTGCATAT
AAAAAAAAGA TTGATAAATA A
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| Protein sequence | MRSLIIETSL IILLTLILYL FEPEASELLA YYHNGIAEGE IWRLISATFC HTNFNHLVLN
IVGLVITLAL FVDLFKTIKI FPIIIFCSLF IGLCLFFFDT EVIWYVGLSG VLHGLFSYGV
VTDIAKKDPW GYLLGAGLVI KIIYEQMFGA SQSTINLIAA EVLVNAHLYG AIAGFIFFAY
KKKIDK
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