Gene Ping_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0823 
Symbol 
ID4625464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1027159 
End bp1027962 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content42% 
IMG OID639796023 
ProductABC transporter ATP-binding protein 
Protein accessionYP_942265 
Protein GI119944585 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0106274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGTT GTGAAAATTT ACACGTTACC TTTAATCATG GTTTACCAAC AGAAAAACTT 
GCATTACAGG GAGTTGATCT GACCATACCA TCGGGTGAAT TTGTAACAGT GATTGGTTCT
AATGGCGCGG GTAAATCTAC CTTACTCAAT ACTATTGCCG GTGATATAAA ATCAACTCAA
GGTAAAATTT ATTTTGATGA TCGGGATGTC ACAAAGTTGC CAGCCACGGG CCGTACTAAG
GATATTGCCC GTGTCTTTCA AGATCCCTTA GCGGGAACCT GTGGTAACTT AACTGTTGAA
GAGAATATGT CACTTGCTTA TGGGCGGGGG AAGCGCGGGA CACTGGCGTT TGCTCTAAAC
AATAAATTGC GCAAGGTGTT CAAGGAGCAG TTAAGCCGAT TAAATCTGGG TCTGGAAGAT
CGTCTGGACA GTGAAATGGG GCTTTTGTCC GGTGGGCAAC GCCAATCAGT CAGCTTACTG
ATGTCGGCAT TACAGCCAAG CAGCATTTTA CTGCTGGATG AGCATACGGC TGCGCTGGAT
CCAAAAACAG CCGCTTTAAT TTTGGATATA TCATCACAAA TTATTAAAGA AAAACAATTA
ACTGTGATGA TGGTGACTCA TTCTATGCGG CAAGCCTTAG ATCATGGATC GCGTACTATT
ATGCTTCATG AAGGTAATAT TATTTTTGAT TTGGCAAGCA AAGAGCGTGC TAATTATCAA
GTTAAAGATT TGCTTAATCT ATTTGCTCAA GCACGCACCG ATGGTGCAGA GTTAGACGAC
GATAAATTAT TATTAGGCGG ATAA
 
Protein sequence
MISCENLHVT FNHGLPTEKL ALQGVDLTIP SGEFVTVIGS NGAGKSTLLN TIAGDIKSTQ 
GKIYFDDRDV TKLPATGRTK DIARVFQDPL AGTCGNLTVE ENMSLAYGRG KRGTLAFALN
NKLRKVFKEQ LSRLNLGLED RLDSEMGLLS GGQRQSVSLL MSALQPSSIL LLDEHTAALD
PKTAALILDI SSQIIKEKQL TVMMVTHSMR QALDHGSRTI MLHEGNIIFD LASKERANYQ
VKDLLNLFAQ ARTDGAELDD DKLLLGG