Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0558 |
Symbol | |
ID | 4623935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 721285 |
End bp | 722634 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639795754 |
Product | glycoside hydrolase family protein |
Protein accession | YP_942011 |
Protein GI | 119944331 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0874314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAC AGCTCCAGAA AATGTATTTT TGTATTGGTC AGAAACTACA AAAATCACGG ACAACTCTTT TAGCAGCTTT ATTAATGCTC AGCTTCAGCA GCTCGGCAAT GGCTGGCTGG GAACTGCAGT GGATTGATAA ATTTGATGGA ACAAGTGTTA ACTGGGATAA CTGGACCGCG CAGACACAAG CCAACTATAA CAATGAAGTA CAGTGCTATA CCAATGATGA CAGCTCGGTG AATAAAAACT ATGATGTTTC GGACGGCACC CTGAAAATTA TTGCCCGTAA ACAAAACATT AATTGTCCCG GCTTAGGCGG CACGCAAAAA AGCTGGACCT CGGGCCGTTT AAACAGCAAA GATAAAAACG AATTTCTTTA TGGACGGATA GAATCAAGAA TCAAATTCCA CAATTTAGAA GGTGGTACCT GGCCAGCATT CTGGATGCTG GAAAATCGTA TTGCTGAGCA ACCTGTTAAG GGTGATGGTG ACTCTATTAA CTGGCCCAAT GCAGGGGCTG GCGAAATTGA TGTCTGGGAA TGGTTTTCTA ACGCACCTAA TACTTATATC ACTAACTTCT TTAACACCGA AAGCTGTGCT GGTGAGACGC TGTATAGCTA CCCGAACGGT GGACCTGATG TACAAAACTG GCACAACTAC GCACTGGAAT GGAGCAAAGA TAACACCTCT TTTTACATTG ATGACATTCT GGTTGTCTCA CAAGATATGA GTAGTTGTAA TCAATATCAA GAACCAATGT TTGTGCTGCT CAATGTCGCA ATGGGTGGCA ACTTAGGTGG CAACATCAAC CCAAGCCTCA CCCAAGCCAC AATGGAAATC GACTATGTTG CCCACTGTCA ACCTTCTGCT GCCAACAACG CAACTTACTG CAATCAAGCA CTTGCCGAGC AAAATAATGG TTTGCCCGAG GTCAGCATCA AGATCACTCA AAACGGGTAC ACTATTACTG ATATTAACCC CGATAATGGT TTAGTCACAC TCAGCGCACA AACCGGCAAT ATAAATGCAG ACAGCAGTTA CAGCTATGAC TGGTATACCA GTGGCCTGGC CAGCCCGATC ATAACAGGGA ATCAAATAAA CTTTGACCCG TCTTCAATGG TTAATGGTTA TTATTATGTG TCTGTTATCC TGACGGACGA TCAGAATCCC ACACAGACAG ATAGAGATGC GCAAACACTT AAAGTGATAT CGGAGTCAAT ATCCACCAGC AATACAATTA ATGCCAACAG TACGGGTGGT AGTATAAGCG CAGGCATTTT ATTATTTTTA GGTTTATTGG GCTTGTTCCG CGCCCGGCAC AGCCTCCCCC ATCAAAGCGC AGGCAAATAA
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Protein sequence | MTLQLQKMYF CIGQKLQKSR TTLLAALLML SFSSSAMAGW ELQWIDKFDG TSVNWDNWTA QTQANYNNEV QCYTNDDSSV NKNYDVSDGT LKIIARKQNI NCPGLGGTQK SWTSGRLNSK DKNEFLYGRI ESRIKFHNLE GGTWPAFWML ENRIAEQPVK GDGDSINWPN AGAGEIDVWE WFSNAPNTYI TNFFNTESCA GETLYSYPNG GPDVQNWHNY ALEWSKDNTS FYIDDILVVS QDMSSCNQYQ EPMFVLLNVA MGGNLGGNIN PSLTQATMEI DYVAHCQPSA ANNATYCNQA LAEQNNGLPE VSIKITQNGY TITDINPDNG LVTLSAQTGN INADSSYSYD WYTSGLASPI ITGNQINFDP SSMVNGYYYV SVILTDDQNP TQTDRDAQTL KVISESISTS NTINANSTGG SISAGILLFL GLLGLFRARH SLPHQSAGK
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