| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0483 |
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| Symbol | |
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| ID | 4626863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 610888 |
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| End bp | 612108 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639795675 |
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| Product | cyclic-di-GMP regulatory protein |
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| Protein accession | YP_941938 |
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| Protein GI | 119944258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAGTA AATCGTCCCT CAACATTTTG ATCATCGATG ATCAGCCCTT TATGCTCAAA
CTGCTTGAAC ATATGTTGAT TAGCTTGGGA TTTAATCAGC CGACAATTTA TGACAACGGG
AAAAAGGCCT TAGCATCGTT AGATAGTGCG AGTAGTCAAA CGAATTTAAT CCTGCTCGAT
CTCAATATGC CAGAAATGGA CGGCATAGAG GTCGTACGAC ACTTGGCTGG AAAATCTTAT
TCCGGCAGTA TTATTCTGGT GAGTGGCGAA GATGCTCGTA TGTTGCAATC CGTAGAAAGA
CTGGTGAGGG CGCACAACAT ACCGCTGCTT GGCTCCTTGC AAAAACCCAT TAATCCAAAA
GATTTGTCGA TCCTCATCGA TAGCTGGGAG CCCCCCAGCT ATGTAAATCC ACCGGCCGTG
AAGAAAATTT ATGGTGCCGA CGATGTGCGT GCAGCCATAG TCAATCACCA ACTAGTGAAT
TACTACCAGC CCAAAGTAGA TGTGGCCAAC GGCAAGGTAA TGGGCGTCGA GACCCTAGTG
CGCTGGCGTC ACCCCCAAGA TGGACTGGTT TTTCCAGATC AATTTATTGG TGTGGCTGAA
GATAATGGAC TGATTAACGA CCTGACACGA GAGGTCATCA GTGACGCATT CTCTCAAACC
AAAATTTGGC TAGATGCGGG CTTGAGTCTG CGAGTAGCTG TTAACCTTTC CATGGAAAAT
CTTGATTCAC TGGAGTTTAC AGATTACGTC ACGACGGCTG CCGCCACTGC AGGTATCATA
CCGGACGACA TAGTATTGGA AGTAACTGAA AGCCGGTTAA TTAAGAGTTT AACTACGCCA
ATGGAAGTCC TCACCCGTTT GCGCCTAAAA CGTTTCCACT TATCGATTGA CGACTTTGGC
ACCGGGCATT CATCGCTGAT GCAGTTGCTA GACTTGCCCT TTAATGAGCT TAAAGTCGAT
CAAGGCTTTG TCCATGGTGC CGCCAGCAAC GAAAAATTAT GCAGTATTTA TAACGCAAGC
CTGAGTTTGG CTCAACAACT CGGCATGAAA TCAGTGGCGG AAGGTGTAGA GGATCAAGCT
GACTGGGATT TTATACGTAG CTCAGGCTGC GACCTCGCCC AAGGTTACTA CATCGCGAAA
CCCATGCCAG CAGATGAAAT TCACGATTGG ATCATAAAAT GGGAAGCGAA CAGGGTAAAT
CTCATTACAC CATATGATTA G
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| Protein sequence | MVSKSSLNIL IIDDQPFMLK LLEHMLISLG FNQPTIYDNG KKALASLDSA SSQTNLILLD
LNMPEMDGIE VVRHLAGKSY SGSIILVSGE DARMLQSVER LVRAHNIPLL GSLQKPINPK
DLSILIDSWE PPSYVNPPAV KKIYGADDVR AAIVNHQLVN YYQPKVDVAN GKVMGVETLV
RWRHPQDGLV FPDQFIGVAE DNGLINDLTR EVISDAFSQT KIWLDAGLSL RVAVNLSMEN
LDSLEFTDYV TTAAATAGII PDDIVLEVTE SRLIKSLTTP MEVLTRLRLK RFHLSIDDFG
TGHSSLMQLL DLPFNELKVD QGFVHGAASN EKLCSIYNAS LSLAQQLGMK SVAEGVEDQA
DWDFIRSSGC DLAQGYYIAK PMPADEIHDW IIKWEANRVN LITPYD
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