Gene Ping_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0222 
Symbol 
ID4627163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp279687 
End bp281114 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content45% 
IMG OID639795414 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_941688 
Protein GI119944008 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTC GAATCGTTTA TCTGCGCAGC TTAAATATAC AAGGGCTTAC TAAAATGACC 
GATGACAAAA ATAATTTACT GCACCGTGGC CTTGATAATA TTCAGCCTCC TTTTTCAAAC
TTTATCCGCG CGCAGGCAAC GGCCAGTGTG TTTCTTCTGG TTGCAACGAT TACTGCTCTG
TGGTGGGCAA ATTCAGATTA TTCATCTACC TATCAGATGC TAAAGCATAT GCAGATTGGT
TTTTTTCTGG GCGATATCGA GCTGCAGGCT TCACTTAAAC ATATTATTAA TGATGGTTTG
ATGGTTATCT TTTTCTTCTT TATCGGGCTT GAGATAAAAC GTGAAGTGCT CGCCGGGGAT
CTCGCTATCG CAGAAAATCG GCGCATGTTG ATTCTTTGTG CTCTCGGTGG GATGATTTGT
CCGGCTGTTA TCTATTCATT ATTTAACTGG TCACTTGATT CTCAGATTGG CTGGGGGATC
CCGATGGCAA CCGATACGGC ATTTGCATTA GGTGCGCTGA CCCTAGTTAG AAAACATATT
CCCATCAGTT TGTTAGCTTT TCTCGTTGGC CTTGCCATTG TAGACGATGT TGGTGCGATA
GTCGTGATTG CATTATTCTA TACACAGGAG ATATCTGTCA TTTTCCTGTC GATCTCATTT
TCCCTGATCG CGTTTTTGGC CATCGCTAAT TATGCTGGTG TCCTCCGGCC AATTTTCTAT
ATTCTGATCG GGATTGCCGC TTGGTGGACG ATGCTTAAAT CTGGCGTTCA TCCCACTTTT
GCCGGCGTCG CCATTGCTTT AACCGTACCC GCACGACCCA TGTTACCGCC AGATGAATTA
CTCTCTAAGG TGAAAGCTAA AATTACAGCA ATGAAGAAGA ACAAAGGTCA TCAACTCGAT
GCGCTTGCTA ATCGAGAGGA TCATGAACAA GTGCTGGATG TTCGTGATTT TGCAGAACAT
GGCAGTGCTC CCCTGCGCCG CTGGGAAGAT GCATTGGACT TACCCGTCTC ATTATTTGTC
CTGCCACTGT TTGCTCTGGT TAATGCCGGT GTGGAAGTTA GCTTCAGTTC ACTTATCGAA
ACCCTTCAGC ATTCAGTTGG GTTGGGTATT GTGATTGGGT TGGTTATTGG TAAATTTGTT
GGCATTTCCG GTGCATGCTG GCTTGGTCTG CGCTACAAAA TAGGGAGTTT ACCGGAGGGC
ATTAATATGC AGCACGTGAT AGGTATGTCA CTGATAGCCG GTATTGGCTT TACCATGTCG
ACATTTATAG CCACACTGGG CTTTGACTCG CAACCTGAAT ATCTTCAAAG CGCCAAAGGA
TCTATTTTGT TCGCCTCACT TCTTTCTGCC ATTCTGGGTC TGTTATATCT CCGGATTATT
GCTGCAAAAA AAGCACCCAA TTCTGCATCA AAAAACGGAG AGAATTAG
 
Protein sequence
MNLRIVYLRS LNIQGLTKMT DDKNNLLHRG LDNIQPPFSN FIRAQATASV FLLVATITAL 
WWANSDYSST YQMLKHMQIG FFLGDIELQA SLKHIINDGL MVIFFFFIGL EIKREVLAGD
LAIAENRRML ILCALGGMIC PAVIYSLFNW SLDSQIGWGI PMATDTAFAL GALTLVRKHI
PISLLAFLVG LAIVDDVGAI VVIALFYTQE ISVIFLSISF SLIAFLAIAN YAGVLRPIFY
ILIGIAAWWT MLKSGVHPTF AGVAIALTVP ARPMLPPDEL LSKVKAKITA MKKNKGHQLD
ALANREDHEQ VLDVRDFAEH GSAPLRRWED ALDLPVSLFV LPLFALVNAG VEVSFSSLIE
TLQHSVGLGI VIGLVIGKFV GISGACWLGL RYKIGSLPEG INMQHVIGMS LIAGIGFTMS
TFIATLGFDS QPEYLQSAKG SILFASLLSA ILGLLYLRII AAKKAPNSAS KNGEN