| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4053 |
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| Symbol | |
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| ID | 8255187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4897446 |
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| End bp | 4898549 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644937717 |
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| Product | carboxylate-amine ligase |
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| Protein accession | YP_003094306 |
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| Protein GI | 255533934 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2170] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02050] uncharacterized enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00732082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG ATTTTACCCT CGGTATAGAG GAAGAATATA TGGTAACAGA CCCTGTGACC
AGGGAACTGA CCTCGCACGA CCAGAAGATA GTTGAAGCGG CACAAAAGAT ACATAAAGAC
CAGGTAAAGG CCGAGATGCA CCAGGCGGTG GTAGAAGTGG GTACCGGAAT TTGCAGGAAT
ACCGACCAGG CAAGGGCGGA AATTTCGCAG CTGCGCTATA CGGTTTCGCA ACTGGCCGGC
GAGCTGGGAC TTAGGATTGG TGCTGCCGGT ACACATCCTT TTTCCCATTG GGAAAAACAG
CTGATTACCG AACATCCCCG TTACAGCGAC ATTGTGAACG AGCTGCAGGA GGCCGCGCGC
TCTAACCTGA TTTTTGGACT GCATGTACAT GTGGGCTTCC AGTCGCGCGA GCTGGCCATA
CACATTGCTA ACCAGGTGCG CTATTTTTTA CCGCATGTTT TTGCCCTTTC AACCAATTCC
CCCTTCTGGG AAGGGAGAAA TACAGGGTAC AAATCGTTCC GCACCAAGGT TTTTGACAAA
TTTCCGCGAA CAGGCATTCC CGATATTTTT AACAGCATTG AAGATTATGA CAATTATGTA
AAGCTGCTGA TCAAGACCAA CAGCATTGAC AATGCCAAAA AAATCTGGTG GGACATCAGG
GTGCATCCTT TTTTTGAAAC CATAGAATTC AGGATCTGTG ATTGCCCCAT GCTGATCGAT
GAAACCATGG CCTTTGTTGC CTTGTTTCAG TCCTTGTGCG CAAAACTGTA CAAGCTGCGC
CTGCAAAACA TGAAGTTCAT CAGCTATTCC AGGGCACTGA TCAATGAGAA TAAATGGCGG
GCCGCACGTT ATGGAATTGA TGGTAACCTG ATTGATTTTG GGAAAGAAAT GGAGGTAAAC
TGTCGCAACC TGGTACTGGA GCTACTGGAT TTTGTGGACG ATGTAGTGGA CGACCTGGGT
TGCCGCAGGG AGATCAATTA TGTAAGCCAG ATACTGGCCA ACGGAACTGG TGCCGACAGG
CAATTGGCTG TTTACGAACA ATTTGGTAAC TTTGAGGCAG TGGTAGATTA CATTACCACG
CAAACTTTAA TTGGGGCTAA ATAG
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| Protein sequence | MMNDFTLGIE EEYMVTDPVT RELTSHDQKI VEAAQKIHKD QVKAEMHQAV VEVGTGICRN
TDQARAEISQ LRYTVSQLAG ELGLRIGAAG THPFSHWEKQ LITEHPRYSD IVNELQEAAR
SNLIFGLHVH VGFQSRELAI HIANQVRYFL PHVFALSTNS PFWEGRNTGY KSFRTKVFDK
FPRTGIPDIF NSIEDYDNYV KLLIKTNSID NAKKIWWDIR VHPFFETIEF RICDCPMLID
ETMAFVALFQ SLCAKLYKLR LQNMKFISYS RALINENKWR AARYGIDGNL IDFGKEMEVN
CRNLVLELLD FVDDVVDDLG CRREINYVSQ ILANGTGADR QLAVYEQFGN FEAVVDYITT
QTLIGAK
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