| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3966 |
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| Symbol | |
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| ID | 8255100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4773470 |
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| End bp | 4776922 |
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| Gene Length | 3453 bp |
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| Protein Length | 1150 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937630 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003094219 |
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| Protein GI | 255533847 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0876858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAGAA AAATAACCAC AAACCTGGGT ATAATAAATT CTTATATCCG TAAAATTTGG
CTAATTATGC GATTAACCAC CGTAATACTA ATAGCTGCCC TGATGCAGGT AAGTGCTGCC
GGCCTTGCAC AGAAAATTAC TATTTCAAAA AAACAAGCAG ACTTACGTGC TGTACTAAAA
GTGCTAAGGA CTCAGAGTGG CTATAATTTT GTGTATGCAG ACAATGCGCT CTCTCAGGCT
AAGCCTGTTG ACATTTCTGT AAAAGCTGCC GACTTTAAAG ATGTTTTAGC GCAAATATTT
GCCAATCAGC CTTTAACTTA TAAGATTGAC AATAACGTTA TCATTGTTCA AATAAAGCCA
AGTGTGATGA TGCAACCTCT TAGAAAAAAT ATCAGCGTTT CAGGTGTGAT CAATGATGAA
GAGGGGAATC CATTGCAGGG CGCAGGCGTA AGAATGAAAG GTGGGGATAA AAAAGCAGTT
GCTGATAAGA ACGGACGCTA TAGTATAGAG GTTCCGGATA ATGCAATACT GGTTTTTACC
TACCTCGGTT TTGATGACCG GGAAATGCGG GTTGAAGGAA GACAAACCAT TAACGTTACA
CTAAAACCGC AGATCAGCAA ACTGGATGAG GTTTTAGTGG TAGGATATGG ATCCGTACGA
AAAGTTGATC TTACAGGTTC TGTTGCGCAG GTAAATATCC GTGATATGAC TAAAGCTCCG
GTGTCTTCTA TAGAACAGGC ATTGGCGGGC CGTGTGGCTG GTTTAAATGT TTCTGCCAGT
CAGGGACAGC CCGGAGAAGA AGGGATCAAT ATACGGATCA GAGGAGTGGG CTCCATCACA
CAGGATGCGT CCCCTTTGTA CGTCATTGAT GGCTTCGCAA CAGAGAACTT TGATCTTTCT
ATGTTGAACC CTGACGATGT GGAATCCATA AATGTGCTCA AAGATGCTTC CGGAACTGCG
ATCTACGGCT CCAGAGGTGC AAATGGTGTC ATTGTTGTAG AAACAAAAAA GGGTAAAGTG
GGTAAACCCA ATTTGAATTA TTCAGGATCC TACGGTTTTC AGGATGTGAC TAAAAGGGTT
GAGGTATTAA GTCCTTATGA GTTTGTTAAA TTGGAATTTG AGCGGGATTC GGTAACTGCC
AGGACGCTGT ATCTCCCGGA CGGCGTAACC TATGACTCCT ATAAAAATCT GGAAGGGATC
AACTGGCAGG ATCAGTTCTT CACCAAAGGT GTAACCAATA TTCACAATTT ATCACTGCGG
GGAGGGAATA AAGATACCAG GTATGCCATT TCAGGATCCT TGTTTGAGAC CGGCTCTGTG
GTAGTAAATA CGGGTTTGAA GAAACAACAG GGACGCATTA CTACAGATCA GAACGTCAGC
AAAAAATTGA AAGCTGGCCT GAGCACAAAT TATACACACA CGCAGACCTA TGGCCAGATC
GCTTCTTCTA TAAAAGATGG CTATGCATCG AGTGCGCTTC TTTATTCAGT ATGGGGATAC
AGGCCAGTTA ACGCCAGATA TTTGACAGGC GACATAGATC TGGAAGAAGA ACTTTTTGAT
GAAGGTGTAA CCAGCACTAC AGATTACCGC TTCAACCCGG TGCAGTCTGC AAAGAATGTT
TACAGAAATA AGGACAACAA TAACCTGGTT GCCAATGGGT ATTTTAATTA TGACATCACT
AATAATCTGG TCTTCAAATC TACCGGTGCC ATTAACCTGA ATACCATTCA ATTGGGTACA
TTCTATAACT CCAATACGAG CGAAGGTAGC CCCATAAGCC CTAGAAATAA CTATGGACAG
TGGGGGTCAA TGTCCTATAG CAGCCGCACA ACCTGGTCTA ACGAAAATAC CCTTACCTAT
AGCAAGGTAA ACAAGGTTCA TTCCTTAAAC GTATTGGGTG GTTTTAGTTT CCAAAAGGAA
AGCAGCAAAG GAAATAACTA TACAGCAATT AAAGTTCCTA ATGAGACTTT GGGCATAGAC
GGATTGGGGC AAGGTACGCC GCTGGCTGTA GGCTCTTTCG GCACTTATAA TACCCTGCAA
TCTTATTTCA GCAGAGTAAA TTATGGGTAT CAATCCAGAT ACCTGTTCAC AGCAACATTC
AGGGCCGACG GGTCGTCTAA ATTTCCGAAT AACAAATGGG GTTACTTTCC ATCAGGAGCT
TTTGCCTGGA AAATGAAGGA AGAGTCTTTT CTTAAAGGAA TTGAAACCAT TACAGAAGCC
AAATTACGTT TGAGTTACGG CCTTACCGGG AACAACAGAG TAGGGGATTT TTCTGCGCTT
TCACCAATCA ATGTAGACAA CTCTACTGGT TATTCTTTTG GGAATGAGGT GCCAACACCA
GCAGCCATCC CTACGATTGG CAATCCCAAA TTAAGATGGG AAACTACTGC GCAGCTCAAT
TTAGGATACG ATTTAGCTTT ATTGAAGAAC AGGATTGAGC TGGTGGTAGA TCTATATCGA
AAGAAAACAG ACAATTTGTT GCTGCTGGCC AATATGTCGC CAAGCACAGG GTATGCCCGT
GCCTACAAAA ACGTAGGTAA ATTAAAGAAT GAGGGTTTGG AATTTACCTT GAATACGGTG
AATATCAATA AGCGGGATTT TACCTGGCGG AGTAATTTTA ACATCAGCTT CAACCGGAAT
ACCATTTTAC AACTAGCTGA TGAAGAGGAA CGCTTGTTGA ATAGTATCAC ACCCAGATGG
CAATCCGGAT ATGCTGACCC GGTATTGTAT AGTGCAGCAA TAGGTCATTC AGTAGGTAAT
TTCGTTGGGT ACATCTTTGA TGGGATTTAT CAGTACGATG ATTTTTATCA ATTGCCCAAT
GGCGGTTACC GCCTTAAAAA TGCTGTGCCG ACAAATGGGA TGGCCAGAGA GGTCATCAAA
CCAGGATATA TCCGCTATAA AGACCTGAAC AATGACGGAG TCATCACAGC GGCCGATCAA
ACCATTATCG GCAGGGGTTT ACCTATTCAT TCTGGTGGTT TTTCCAACAA TTTTACTTAT
AAAAACTTAA GTCTGAACGT CTTCTTGCAA TGGTCTTATG GCAATGATGT ATACAATGCA
AACAAACTGA TTTTTGAGGC AAAAGCATAC AGCATGCTGA ATCAATATGC GGGTTATGCG
AATCGGTGGT CGCCTGCAAA TCCGAGTACG ACCATACCGG TTGTGGGTGG GGTTCCTGAG
GGCTATTATT CGACCAGGGA ATTGGAAGAT GCTTCCTATT TAAGGTTGAA AACTGTGGAA
TTGGCTTACA GCGTACCAGT GAATTACCTG AAAAAATTAG GACTTAAAGA GGTCATCCTG
ACAGCTTCTG CACAGAATCT GCTTACATGG ACCAACTATT CAGGAATGGA TCCGGAAGTG
TCCACGCGCA ATTCCATCTT GACTCCAGGG TTTGACTATT CTGCATTCCC TATTGCGAAA
ACATTAGTTT TTGGACTAAA GGCTTCATTA TAA
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| Protein sequence | MYRKITTNLG IINSYIRKIW LIMRLTTVIL IAALMQVSAA GLAQKITISK KQADLRAVLK
VLRTQSGYNF VYADNALSQA KPVDISVKAA DFKDVLAQIF ANQPLTYKID NNVIIVQIKP
SVMMQPLRKN ISVSGVINDE EGNPLQGAGV RMKGGDKKAV ADKNGRYSIE VPDNAILVFT
YLGFDDREMR VEGRQTINVT LKPQISKLDE VLVVGYGSVR KVDLTGSVAQ VNIRDMTKAP
VSSIEQALAG RVAGLNVSAS QGQPGEEGIN IRIRGVGSIT QDASPLYVID GFATENFDLS
MLNPDDVESI NVLKDASGTA IYGSRGANGV IVVETKKGKV GKPNLNYSGS YGFQDVTKRV
EVLSPYEFVK LEFERDSVTA RTLYLPDGVT YDSYKNLEGI NWQDQFFTKG VTNIHNLSLR
GGNKDTRYAI SGSLFETGSV VVNTGLKKQQ GRITTDQNVS KKLKAGLSTN YTHTQTYGQI
ASSIKDGYAS SALLYSVWGY RPVNARYLTG DIDLEEELFD EGVTSTTDYR FNPVQSAKNV
YRNKDNNNLV ANGYFNYDIT NNLVFKSTGA INLNTIQLGT FYNSNTSEGS PISPRNNYGQ
WGSMSYSSRT TWSNENTLTY SKVNKVHSLN VLGGFSFQKE SSKGNNYTAI KVPNETLGID
GLGQGTPLAV GSFGTYNTLQ SYFSRVNYGY QSRYLFTATF RADGSSKFPN NKWGYFPSGA
FAWKMKEESF LKGIETITEA KLRLSYGLTG NNRVGDFSAL SPINVDNSTG YSFGNEVPTP
AAIPTIGNPK LRWETTAQLN LGYDLALLKN RIELVVDLYR KKTDNLLLLA NMSPSTGYAR
AYKNVGKLKN EGLEFTLNTV NINKRDFTWR SNFNISFNRN TILQLADEEE RLLNSITPRW
QSGYADPVLY SAAIGHSVGN FVGYIFDGIY QYDDFYQLPN GGYRLKNAVP TNGMAREVIK
PGYIRYKDLN NDGVITAADQ TIIGRGLPIH SGGFSNNFTY KNLSLNVFLQ WSYGNDVYNA
NKLIFEAKAY SMLNQYAGYA NRWSPANPST TIPVVGGVPE GYYSTRELED ASYLRLKTVE
LAYSVPVNYL KKLGLKEVIL TASAQNLLTW TNYSGMDPEV STRNSILTPG FDYSAFPIAK
TLVFGLKASL
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