| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3902 |
|---|
| Symbol | |
|---|
| ID | 8255036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4694681 |
|---|
| End bp | 4695709 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644937566 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003094155 |
|---|
| Protein GI | 255533783 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.661278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG CCATCCTGGT TAATCCACTG ATTCCCGTAC CACCCGAACA ATATGGGGGC
ATTGAACGGA TCGTTTACCT GCTGATCAAA GAACTCCAGA GAAATGGCCA TGAGGTTATA
CTATATGCGC ACAAAAACTC ACAGGCCGGT TGTAAGTTAA TCGCCTATCA GGAATCCGTA
AATTATGGTG CAAAAGATTT TATAAAGATT AATGCCTTAA CTGCAAAAAT TGCTTTTCAG
GATTTTGATG TGTTGCACAC CTTTGGACGT ATGAACAATA TCGCTTTGAT GATGTGGAGC
AAGATACCAA AGGTGGTATC CTATCAATTG CCCCCTACTA TTTCACAGGT AAAAAAAGCC
ACAAAAATAG CCTTCAAAAA TACTTTGTAT TTTACTGCCT GCAGTAATTT CATAGCCAGG
CAGATCAATA AATTTGCAAA TGTTACTACC ATTTACAATG GGGTAAACAT CAACGAATAT
CAGTTTAACG CAACAGTATC CGCTGATGCC CCACTTGTAT TTTTAGGAAG GATACAGGAA
GAAAAAGGTA CATCCATTGC CATACAGGTA GCAAGGACAA CAGGCCGGAA ACTAATTATT
GCCGGTAATA TCCCTGCAGA AGAAACCCAC AAGCAATATT TTAGCACCAA AGTAAAACCA
TTTATAGACG ATGTGCAGAT CAGCTATATT GGCCCGGTAA ACAATTTTCA AAAAAACGAG
TTACTTGGAA ACAGTTATGC TCTGTTAATG CCGGTAACCT GGGACGAACC TTTTGGTATT
GTAATGGCCG AAGCTTTGGC TTGCGGGACA CCGGTAATTG GTTTTAACAG GGGCGCTATA
CCCGAAGTGG TCATTAATGG ATTAAATGGT TTTGTATGCA ATACCCTTAC CGAAATGATT
GCCGCGGTTG GCCACATCCC AGAGGTCAGC AGGCTTACAT GTCGTGGTAC TGCTGAAGAC
AGGTTTAATG CCGTTGTGCT GGGCAAACAA TATGAAAACC TTTACAGAAA GGCGATAAAC
AGGCGTTGA
|
|---|
| Protein sequence | MKIAILVNPL IPVPPEQYGG IERIVYLLIK ELQRNGHEVI LYAHKNSQAG CKLIAYQESV
NYGAKDFIKI NALTAKIAFQ DFDVLHTFGR MNNIALMMWS KIPKVVSYQL PPTISQVKKA
TKIAFKNTLY FTACSNFIAR QINKFANVTT IYNGVNINEY QFNATVSADA PLVFLGRIQE
EKGTSIAIQV ARTTGRKLII AGNIPAEETH KQYFSTKVKP FIDDVQISYI GPVNNFQKNE
LLGNSYALLM PVTWDEPFGI VMAEALACGT PVIGFNRGAI PEVVINGLNG FVCNTLTEMI
AAVGHIPEVS RLTCRGTAED RFNAVVLGKQ YENLYRKAIN RR
|
|---|
| |