| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3877 |
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| Symbol | |
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| ID | 8255011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4660845 |
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| End bp | 4663955 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937541 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003094130 |
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| Protein GI | 255533758 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG CTATACTCAT TTTTACATGG GTATTCTCCC TTCTGCTTTT CCAAAAAGCC
TTGGCGCAGA CTGTAAATAT CCGGGGAAAG ATCACTGAAG CGGGTATACC CTTACCTGGA
GTAGGTGTAA AAGTAAAAAA CTCCAAAGTA GCTACAGTAA CCGATTCGAA TGGGGAATTC
TTAATCAAGG CATCAGGCAC AGACGTCCTG ATCCTTTCAT TTATTGGTTT CAGCACAAAG
GAAGTTTCCA TAAAGGGGCG GACTTTTATT ACTGAATCTA TGGAGGCCGA CAAGCAGCAA
CTGGATGAAG TGCTTGTTGT GGGCTATGGG GTACAGAAAA AGATCACCTC TACTGGGGCA
ATCACCTCTG TATCCGGTGC CGACCTGGTC AGGGCGCCTG TTGCCGGAAT TAGCAATGCC
TTAATTGGTT TATCCAGCGG CATACAGGCC ATTCAAAGTT CCGGCGAATT TGGAAGCGAT
AAAGCCCAGA TCAGGATCAG GGGTATGGCC ACACTGAATG CCGGGGGTAG GGACCCCTTG
ATTATGGTGG ATGGGGTGGA AAGGGAAACC TATAACAACA TAGACCCAAA TGAGATAGAA
TCCATTAACA TACTGAAAGA TGCCTCTTCT ACAGCAGTTT ATGGTGTTCG TGGTGCAAAC
GGGGTAATCA TCATTACTAC CAAACAGGGA AAGATAGGAA CACCTGTTGT AAATTTTACC
GGAAATGTGG CTGCTGTACA GCCCATTATA CTTCCAAAAT ACCTCAATTC TTATGATTAT
GCTGTGTTAA GAAATGAGGC GGAGACAAAT ATGGGTAAAG TACCAACTTT TAGTGAGGAA
GACCTTAGGC TATATAAAAG TGGTGAAGAC CCGATATTTC ACCCAAGTAA AGACTGGATT
AAAGAATTGA TCAGTCCTGT ATCGTTTCAG CAGCGGTATA ATGCCAATAT CTCTGGCGGA
ACAGAAAAGT TAAGGTATTT TACCTCCTTC GGTTACTTTA ATCAGGGCGG GGCCTATAAC
CAGCCCGAAC AGGATTTTGG ACTGCCATAC AAGCATAAAT ACGACAATTA TACCATCAGG
ATGAATTTTG ATTTCGACCT GACGAAAGAT TTGTCCATGT CGGTAAAGCT CGGGGAACAA
ATTACGGATA ATGTAGCGCC AAATGGCGGT GCCTATTCTG CTATTGACAG GGCTGCAAAT
GCCTCACCCA TGTCCAGCCC CGCTTTTGTA GATGGAAAGT ACATTGAAGG GGTTATTGGT
CTGCCTTCGG GTGTACCTCA TTTTAACCCA TGGGGACAAC CTGGCCTGAC AAGTTCGGGC
GGTGGTTTTA TTACAGAAAT GTTTGCTAAT ACCTTAAATA CCAATCTTTC CATTAATTAT
AAGCTGGACA GAATAACCCG GGGCTTGTCG GTACGGGCTA TGGGTGCCTA TGATACTTAC
TACCTGAAAA CGGCTGTACG GAGTAAGTAC TTTCCTGCCT ACACGGTTAT GAAAAATACC
GCCAGTCCCG GAGGCTATAT TTTATATCAG AGTAAAGAAG AAGGCCCTTA TTATGGCTTG
TCTGAAGGGA TAAATGACAG CAGAAGGGAT AAATTCAGGA AAATGTACGG TGAACTGGCC
ATAGATTATA AAAGGTCATT CGAAGGAGGT CATAATGTGT CGGGTTTATT GCTGGCAAAT
TTGCAGAAGG CCTATTTTCC TGATCTGGCC TATAAATTAC CAACCGGTTA TCTGGGTTTT
GTATCGAGGG TAACCTACGA TTACAAGAAC CGCTACCTTG CAGAATTTAA TATGGGCTAT
AATGGTTCCG AGAATTTCCC CGAAGGTAAA CGTTTCGGGC TCTTTCCATC CTATTCGCTC
GGTTGGGTGG CTACTGAAGA ACCTTTCATC AGGAAAAATA AATGGCTTTC CTTTTTAAAG
ATCAGAGGGT CTTACGGTGA AGTAGGGAAT GACAAAATTG GCGGAAAGCG GTATTTATAT
CTGGATGGTC CTTATGCACT CGGAAACGGT GGTTTTCAAA AGGTGGTTTT TGGTCAGCAG
GGTACAAATA TGGCAGTTTA CAATGTCTAT ACCGAAGGTG CATTGGGCAA TCCGGACGTA
ACCTGGGAAA CAGCAGTAAA ATACAATATC GGTGCTGAAC TACGGTTCTT TTCAGACCGC
TTGTCTCTGA CTGGTGATTA TTTTGAAGAA AAAAGGGACA ATATTCTCTG GACGCTGTCT
ACCGTTCCGG AACTGGTATC TGCAGAATTG CCTGCCGCCA ATATCGGTAA AGTAAAAAAC
CATGGGTATG AACTGGAGCT GGGCTATAAG GATCAGGTAG GGTCGTTAAA TTACTGGCTT
AAGGGCGCAT ATTCTTTTGC CAGGAACAAG ATCATTTACC AGGATGAACC AACCCGGGTG
TACGAGTGGT TACAGCGTAC AGGCAGGCCC ATTGATCAGT ATTTCGGGTT AACTTTTGAA
GGGTTTTACA ATACCCAGGC GGAAATTGAT GACCCGAACA GGCCCAAATC CCAATGGGAG
GGAACGGGGC TGAAGCCGGG TGATATGAAA TATAAGGACC TGAATGGGGA TGGAAAGATC
ACAACAGATG ATATGGGAAA TATTGGTTAT TCCAGTTCTC CTGAAATTAA CTATAGTATT
TCAGGAGGAG TATCCTGGAA GGGTTTTGAC CTGGCCGTTC TTTTCCAGGG AACAGACCAT
GTTTCGGTAA GTTTCAGCAA TACGGCAGCC TATCCTTTTG TGTCCGACTG GAGTGCCGCA
CAGGAATGGC ATCTGGAGCG TTGGACACCT GAACGTTATG CCAATGGAGA CAAGATAGAC
TTTCCAAGGG TAGAACTTTC ACCAGATAAA CAGCACAATT ATCAGCCTTC AAGTTTTTGG
GTGCAGGACG CCTCTTATTT CCGGTTTAAA AACATTGAGC TGGGTTACAG GTTTGCTACC
AAAGCTTTGC AAAGGGTAGG ACTAAGCTCT ATGAGGGTAT TTGTGAGCGG GAATAACCTG
ATTACCTGGA CTGATTTAAA ATATAGCAAA GACCCTGATG CCCGGGAGTT ATGGGGACGT
GTAACGCCGC CTAACAGGGT ATTTAACTGT GGGGTCAATT TTCAATTTTA A
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| Protein sequence | MKKAILIFTW VFSLLLFQKA LAQTVNIRGK ITEAGIPLPG VGVKVKNSKV ATVTDSNGEF
LIKASGTDVL ILSFIGFSTK EVSIKGRTFI TESMEADKQQ LDEVLVVGYG VQKKITSTGA
ITSVSGADLV RAPVAGISNA LIGLSSGIQA IQSSGEFGSD KAQIRIRGMA TLNAGGRDPL
IMVDGVERET YNNIDPNEIE SINILKDASS TAVYGVRGAN GVIIITTKQG KIGTPVVNFT
GNVAAVQPII LPKYLNSYDY AVLRNEAETN MGKVPTFSEE DLRLYKSGED PIFHPSKDWI
KELISPVSFQ QRYNANISGG TEKLRYFTSF GYFNQGGAYN QPEQDFGLPY KHKYDNYTIR
MNFDFDLTKD LSMSVKLGEQ ITDNVAPNGG AYSAIDRAAN ASPMSSPAFV DGKYIEGVIG
LPSGVPHFNP WGQPGLTSSG GGFITEMFAN TLNTNLSINY KLDRITRGLS VRAMGAYDTY
YLKTAVRSKY FPAYTVMKNT ASPGGYILYQ SKEEGPYYGL SEGINDSRRD KFRKMYGELA
IDYKRSFEGG HNVSGLLLAN LQKAYFPDLA YKLPTGYLGF VSRVTYDYKN RYLAEFNMGY
NGSENFPEGK RFGLFPSYSL GWVATEEPFI RKNKWLSFLK IRGSYGEVGN DKIGGKRYLY
LDGPYALGNG GFQKVVFGQQ GTNMAVYNVY TEGALGNPDV TWETAVKYNI GAELRFFSDR
LSLTGDYFEE KRDNILWTLS TVPELVSAEL PAANIGKVKN HGYELELGYK DQVGSLNYWL
KGAYSFARNK IIYQDEPTRV YEWLQRTGRP IDQYFGLTFE GFYNTQAEID DPNRPKSQWE
GTGLKPGDMK YKDLNGDGKI TTDDMGNIGY SSSPEINYSI SGGVSWKGFD LAVLFQGTDH
VSVSFSNTAA YPFVSDWSAA QEWHLERWTP ERYANGDKID FPRVELSPDK QHNYQPSSFW
VQDASYFRFK NIELGYRFAT KALQRVGLSS MRVFVSGNNL ITWTDLKYSK DPDARELWGR
VTPPNRVFNC GVNFQF
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