Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3737 |
Symbol | |
ID | 8254869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4461280 |
End bp | 4462593 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937399 |
Product | outer membrane efflux protein |
Protein accession | YP_003093990 |
Protein GI | 255533618 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.315415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTA GGGCTTTTAT GTTTGCCTTG GTGCTTTTGT GTACAGGTAC CGGGCTGGCT TATGGACAGG AACAGTTGAG CCTGCAGGAA GCCATTGCTA CTGCACTTAA AAACAATTAT GATATTAAAC TGGTAAATAA CGACATCCAG ATTGCTAAAA ATAATGTAAA CCCGGGAAAT GCAGGCATGC TGCCCAGCCT GGACGGAAGT TTTAGTGATG GGGGAAGCCG CCAGAACATT ACCAGGACAC AGAGCAATGG CAACCAGCAA ACGCTGGACG GGGTGAGAAA TACCAATATG AGCTATGGCG CCTCGCTGGG CTGGACAATT TTTGATGGCT TACAGATGTT TACCAATTAT GAACGGCTGA AAGAATTGCA AAAACAGGGG GAAGTGAACG CCAAAGCCAC TATTTTGACT ACGGTGAGCA ATGTGATCAG CTCTTATTTT ACGGTATTAA AGGAGCAGCA ATTGGTTAGG GCAAGGGATA CGGCACTCGA CATCTCGCAG CTGCGCTTAA GAATTGCAGA CAATAAACTG GCTATTGGCA GGGGCTCTAA ACTGGATGTG CTGGCCGCAA AGGTTGACTA CAATACGGAT ACTGCAGCTT ACCTGCAGGA AATTAACCTG TTGAAAACTG CAAAAACAGC TTTAAACCAG GTAATGGCCA GAGACCTGAA TCTTGATTTT AAGGTGGATG AAGCAATTGA TATAGATTCG AAACTGAATT ATGGCACTTT AGCCGGACAA ATGGAACAGT TAAACCCCGA CCTGCAAAAT GCCTTTATCA GTAAAAAAAT TGCAGAGCTG AATTTAAAGC AGGTAAAAGG TCAGCGCTAC CCAGTAGTAG GCGTAAATGG TGGTTATGAG TTTCAGAAAA GCGCCAGTCC GACCGGCTTT AATACCCAGC AGCGTGCTAC GGGTTTTACA TATGGTCTTA CGGCAAGCCT GAATATCTTT AACGGTTTTT TGCAAAGGCA AAACGAGCGC AATGCAAAGA TAGAGATCAA TTCATCTGCA CTAATGCTGG ACAAGACAAA ACAGGACATC ACAGCCCAGC TGATCTCGAC CTATCAGAAC TACAGTACCA ACCTGGATTT GCTGAAAGTG GAGCAAAACA ATGTAGACAT TGCCAAACAA AACCTGGACA TTACACTGGA AAAATACCGC CTGGGCAGTA TTTCGCCACT GGAGTTAAGA GAGGCGCAAA AAAACTCAAT TGATGCCATT ACCAGGTATC TGGAGGCGCA ATATCAGGCA AAACTTACAG AAATCAGCCT AAAAGAAATC AGTGGTACTT TAAATATTCA ATAA
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Protein sequence | MKSRAFMFAL VLLCTGTGLA YGQEQLSLQE AIATALKNNY DIKLVNNDIQ IAKNNVNPGN AGMLPSLDGS FSDGGSRQNI TRTQSNGNQQ TLDGVRNTNM SYGASLGWTI FDGLQMFTNY ERLKELQKQG EVNAKATILT TVSNVISSYF TVLKEQQLVR ARDTALDISQ LRLRIADNKL AIGRGSKLDV LAAKVDYNTD TAAYLQEINL LKTAKTALNQ VMARDLNLDF KVDEAIDIDS KLNYGTLAGQ MEQLNPDLQN AFISKKIAEL NLKQVKGQRY PVVGVNGGYE FQKSASPTGF NTQQRATGFT YGLTASLNIF NGFLQRQNER NAKIEINSSA LMLDKTKQDI TAQLISTYQN YSTNLDLLKV EQNNVDIAKQ NLDITLEKYR LGSISPLELR EAQKNSIDAI TRYLEAQYQA KLTEISLKEI SGTLNIQ
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