Gene Phep_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3674 
Symbol 
ID8254805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4385635 
End bp4386951 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content43% 
IMG OID644937335 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_003093927 
Protein GI255533555 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAG TAGAGACAAC TTACGTTCCT TACAAGGTTA AGGACATTTC ACTGGCAGAA 
TGGGGCCGCA AAGAGATCGG ACTGGCAGAG GCAGAAATGC CCGGATTAAT GTCATTGCGT
GAAGAATTCG GACCATCAAA ACCTTTAAAA GGTGCCCGCA TTGCAGGATG CTTACACATG
ACCATCCAGA CTGCGGTTTT AATTGAAACA TTGGTAGAAC TTGGAGCAGA AGTGACCTGG
TCATCATGTA ACATCTTCTC TACCCAGGAT CATGCTGCTG CTGCTATTGC CGCTGCAGGT
ATCCAGGTTT ATGCATGGAA AGGCTTAGAC GAAGAAAGCT TTGACTGGTG TATTGAGCAA
ACTTTACACT TTGGTCCTGA GCGCAAACCT TTAAACATGA TCCTTGATGA TGGTGGTGAT
TTGACCAATA TGGTGTTCGA CAGGTTCCCT GAACTGATTG CCGACATTAA AGGTTTATCT
GAAGAAACCA CTACAGGTGT ACACCGTTTA TATGAGCGCA TGAAAAATGG CACTTTACAT
TTACCTGCCA TCAATGTAAA CGATTCTGTT ACCAAATCTA AATTTGACAA TAAATACGGC
TGCCGCGAAT CGCTGGTTGA TGCGATCCGT CGTGCAACTG ACGTAATGAT GGCTGGCAAA
GTGGCTGTTG TTGCAGGTTA TGGCGATGTA GGTAAAGGTT CTGCAGAATC TTTAAGCTCT
CAGGGTGTAC GTGTGATCGT TTCAGAAATT GATCCGATCT GTGCATTACA GGCAGCAATG
GAAGGTTATG AAGTAAAGAA ATTTGCTACA GCAGTTAAAG AGGCTGACAT CATTGTGACC
ACTACCGGTA ACTGTGATAT TGTACGTGCT GAACACTTCA AAGCCATGAA AGACAAAGCT
ATCGTTTGTA ACATTGGTCA CTTTGACAAT GAGATTGACG TGGCCTGGTT AAACAAAAAC
TACGGTGATA CTAAAGTAGA GATCAAACCT CAGGTTGATA AATATACCAT TGATGGCAAA
GACATCATTT TATTGGCTGA AGGCCGTTTG GTAAACTTAG GTTGCGCAAC TGGTCACCCA
AGCTTTGTCA TGTCTAACTC TTTTACCAAC CAGACTTTAG CCCAGTTGGA ACTTTGGACC
AACACAGATA AATATGAGAA CAAAGTATAT GTACTTCCTA AATATTTAGA TGAGAAGGTT
GCCCGTTTAC ATCTGGCTAA AATTGGTGTG GAACTGGATG TTTTAGATCA GCACCAGGCT
GATTACATTG GTGTTCCTGT TGAAGGTCCG TTTAAACCGG AAGCTTACAG ATACTAA
 
Protein sequence
MSSVETTYVP YKVKDISLAE WGRKEIGLAE AEMPGLMSLR EEFGPSKPLK GARIAGCLHM 
TIQTAVLIET LVELGAEVTW SSCNIFSTQD HAAAAIAAAG IQVYAWKGLD EESFDWCIEQ
TLHFGPERKP LNMILDDGGD LTNMVFDRFP ELIADIKGLS EETTTGVHRL YERMKNGTLH
LPAINVNDSV TKSKFDNKYG CRESLVDAIR RATDVMMAGK VAVVAGYGDV GKGSAESLSS
QGVRVIVSEI DPICALQAAM EGYEVKKFAT AVKEADIIVT TTGNCDIVRA EHFKAMKDKA
IVCNIGHFDN EIDVAWLNKN YGDTKVEIKP QVDKYTIDGK DIILLAEGRL VNLGCATGHP
SFVMSNSFTN QTLAQLELWT NTDKYENKVY VLPKYLDEKV ARLHLAKIGV ELDVLDQHQA
DYIGVPVEGP FKPEAYRY