Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3634 |
Symbol | |
ID | 8254765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4346071 |
End bp | 4347597 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937295 |
Product | RagB/SusD domain protein |
Protein accession | YP_003093887 |
Protein GI | 255533515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.623243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAT TTAACAATAA AAATTTCTGT CTGATGCTTT TTAGTATCGC AGCAATTACC TTACTGGCGA GTTGTAAAAA AAGCTTCCTG GATCGCGATC CACAAGGAAC ATACACTTCC GACACCTATC CCTATCCTAA AGGATCAGGT CCATTTGATT CGGAAATATT TGCCACCTAT GACATCCTGC GCTCATATGA TGCCTCTGGA AGCGGATTTA TTGCTGCAAC CGGTATCAGA AGTGACGATG CTGATAAAGG CAGTACACCT ACCGATGGCC CTACCTCACT TGAAATGGAC AATTTCAACA TTACCACCAG TAATGTCCTG GCAAATGATC TTTGGAGAGG CTACTTCAAT ATCGTAAACA AGAGCAATAT TGTGCTGGAT AAGGTAGCTA AAGATCTTGA CCCGGGCACA CCAGCAGAAT CAAAAGTATT TGCAGAAGCA GAAGCTAAAT TTTTGCGTGG CTATGCCTAT TTCATGCTGG TACGCTTATT TGGCAGGGTG CCCCTGATAG ACAAAGTATT TGATGATCCC GTTGCCCAAT CTAACGTTGC CCAAAGTGAA CCGGCCGCTA CCTATACCTT AATTGAAAGT GACCTGCAGT TTGCCGGAAC CAACCTGCCC TTAAGCTGGG ATCCAAGCAA GTTTCCCGGA CGAGCAACCA GAGGTGCGGC GAACGGCTTA CTGGCCAAAG TATACCTTAC CCGTCAAAAC TGGGCAGCTG CCCAAAGTGC CGCTAACCTG GTTATTACCT CACAACAGTA CAACCTAAGC ACTCCATATG ATGATATTTT TAAAGAAACA GGTGAAAACA GTAAAGAATC TGTATTCGAA ATTCAGGCAA CAGCTAACCT GACGGAAAAA AGAAGTTTCG GAAGCCAGTT TGCAAGTATC CAGGGTGTAA GGGGAACAGG TATCTGGAAC CTTGGCTGGG GCTTTAATAT CCCAAGTCCA CAACTCGAAG GTACTTATGA AACCGGCGAT CCACGTAAAG CCAGAACCAT TTTATACGCC GGAGGCACCT CAGTTTTTGG TGAAGTTGTT CCTACCGGTT TACCAAATAC CAGGTACAAC CACAAAGTAC ACAGTAATCC TGCAACGCGA AATGCACTGC TTGACAATTT CAGCTATTGG ATGAACATCC GGATCCTGCG TTATGCAGAT GTATTACTGA TGTATGCAGA AGCTGCAAAT GAAGTAGGTG GCACCGCAAA TACCACTGCT GCGCTAGATG CATTGAACAG TGTAAGAAAA AGAGCAAGAG GAACAACTCC GGGTATTTTA CCAGACATCA CGGTAACTGA TCAGGCGCAG CTGCGCGAGA TCATCCGCCA CGAAAGAAGG GTTGAGCTAG CCATGGAACA TGAGCGTTTC TTTGACCTGG TACGCTGGGG CATTGCCGGA CAGGTACTGC AAAATGCAGG GAAAAATTTC GTTACCGGCA AGCACGAACT CTTACCTATC CCTTTTGCAC AGATAGAGAT CAGCAAGGGT GTATTGAAAC AAAATTTTGG TTATTAA
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Protein sequence | MKTFNNKNFC LMLFSIAAIT LLASCKKSFL DRDPQGTYTS DTYPYPKGSG PFDSEIFATY DILRSYDASG SGFIAATGIR SDDADKGSTP TDGPTSLEMD NFNITTSNVL ANDLWRGYFN IVNKSNIVLD KVAKDLDPGT PAESKVFAEA EAKFLRGYAY FMLVRLFGRV PLIDKVFDDP VAQSNVAQSE PAATYTLIES DLQFAGTNLP LSWDPSKFPG RATRGAANGL LAKVYLTRQN WAAAQSAANL VITSQQYNLS TPYDDIFKET GENSKESVFE IQATANLTEK RSFGSQFASI QGVRGTGIWN LGWGFNIPSP QLEGTYETGD PRKARTILYA GGTSVFGEVV PTGLPNTRYN HKVHSNPATR NALLDNFSYW MNIRILRYAD VLLMYAEAAN EVGGTANTTA ALDALNSVRK RARGTTPGIL PDITVTDQAQ LREIIRHERR VELAMEHERF FDLVRWGIAG QVLQNAGKNF VTGKHELLPI PFAQIEISKG VLKQNFGY
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