| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3595 |
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| Symbol | |
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| ID | 8254717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4286913 |
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| End bp | 4288496 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937247 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093848 |
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| Protein GI | 255533476 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.237544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAC AAATGAAAAC AACTTTATTT TATATCGCTA TGATGCTGGC ACTGGTTGTC
ACCTCATGTT CAAAGATCCT GGACACAACC CCACAGGATT TTGTATCACC AATAAATTAT
TACAATACAG AAAGCGAACT GCAATCTGCA TTGGCCGGAG TATACGACCG TTTGGGCGAT
AACAGGGTTT ATTCACAAGG TATGGCCTGC TATATGGTTT TTAGTGACGA GTTTTTCATG
AAAAGTCAGA CATCGGGAAT GAATGCCAAT ATTGTAGATG CTTCTACCCT GGAACTAAAC
AGGCACTGGG AAGCGATTTA TACCGGCATT GAACGCGCAA ATATGTTACT GGAGAACATA
GATAAGGCGG TTAAGGTAAC TGAAGAAAAG CGTAACGAAA TAAAAGGGCA GGCACTTTTT
TTAAGGGCTT ACTATTATTT TATGCTGGCA GATGAGTTTG GGCCGGTACC TTTAAAGCTT
CAATCCAGCA AATCGCCTGA AGAAGCCCCA CTTCCGGGTA CTCCTGTAAA AGATATTTAT
GCGCGTATAG TGGCCGATAT GAAACAGGCA GAGGAGTTGG TAAAGTCGGT TTCTGACTAT
GGCTATAATA CGCGAATTAC GAAAACGACA GTACAAGGTA TACTGGCCAG GGTTTATCTG
ACTATGGCGG GTTTTCCACT AAATGATGTT GCAAAATATG CTGATGCCAG AAGCTATGCA
GAAAAAGTAA TGCTATCTGG ATTGCACGGG CTGAACCCTG ATTTTAAACA GGTCTATATC
AATCATGTGC AGGAAATATT TGACACAAGA GAAAGTTTAT GGGAAGTCGA ATTTAAAGGA
ACGAACCAGG GTGAAATACA GGAGGGTGGT ATGATTGGCA GTTATAATGG CATTACCAGT
GGAAACATTG AGATGGGCTA TGGTTATGAT TATGTGCATG CTACTGCAAA GCTTTACAAT
GCCTATGCAG CTGGCGACCA GAGAAAGGAC TGGACGGTTG CACCTTTCAG ATATGTAACT
ACCGGACAAA CGGCGGTAAA GACCAATTGG GCGGCAGATC AGATATACGA CAGGAGCAAT
GGGAAATGGA GGCGGGAGTA TGAACTTCTT CTGCCAAGAA ATCAAAACTA TACCGGTACC
AACTGGCCTT TGTTAAGATA TGCGGATGTA TTGCTGATGT TTGCAGAAGC TGATAATTAT
GTAAACAATG GTCCATCTGC CGACGCGTAC AAAGCCATCA ATATGGTAAG GCGCAGGGGA
TATGGAAAAG ATGTACTCCT GCCAGATGTC CAGGCAGATG CTGCTGCTGG TTTATCCCAG
CCGGACTTTC TGGACCTGAT CAGGAACGAG CGTCTGCGAG AGCTTGCTTT CGAAGGACTC
CGGAAACATG ACCTTGTAAG ATGGGGCATT TATCCTTCTG TGATGCAGGC GCAGGTTAGA
GAGTACCAGG CCAATATGCC TGCGGCTTTA AAAGACCCTG CTATTGCACA GGCACAACGT
GTAACAGAAC GGGCCGTGCT GTTCCCGATT CCTAACAGCG AGCTGGCCGT TAACCCTAAT
ATTAAACAAA ACACAGGATG GTAA
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| Protein sequence | MFLQMKTTLF YIAMMLALVV TSCSKILDTT PQDFVSPINY YNTESELQSA LAGVYDRLGD
NRVYSQGMAC YMVFSDEFFM KSQTSGMNAN IVDASTLELN RHWEAIYTGI ERANMLLENI
DKAVKVTEEK RNEIKGQALF LRAYYYFMLA DEFGPVPLKL QSSKSPEEAP LPGTPVKDIY
ARIVADMKQA EELVKSVSDY GYNTRITKTT VQGILARVYL TMAGFPLNDV AKYADARSYA
EKVMLSGLHG LNPDFKQVYI NHVQEIFDTR ESLWEVEFKG TNQGEIQEGG MIGSYNGITS
GNIEMGYGYD YVHATAKLYN AYAAGDQRKD WTVAPFRYVT TGQTAVKTNW AADQIYDRSN
GKWRREYELL LPRNQNYTGT NWPLLRYADV LLMFAEADNY VNNGPSADAY KAINMVRRRG
YGKDVLLPDV QADAAAGLSQ PDFLDLIRNE RLRELAFEGL RKHDLVRWGI YPSVMQAQVR
EYQANMPAAL KDPAIAQAQR VTERAVLFPI PNSELAVNPN IKQNTGW
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